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H2-M6-ps histocompatibility 2, M region locus 6, pseudogene [ Mus musculus (house mouse) ]

Gene ID: 14994, updated on 8-Feb-2024

Summary

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Official Symbol
H2-M6-psprovided by MGI
Official Full Name
histocompatibility 2, M region locus 6, pseudogeneprovided by MGI
Primary source
MGI:MGI:95918
See related
Ensembl:ENSMUSG00000083534 AllianceGenome:MGI:95918
Gene type
pseudo
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
H-2M6; H2-M6
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Genomic context

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Location:
17 B1; 17 19.16 cM
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 17 NC_000083.7 (37280099..37282288, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 17 NC_000083.6 (36969207..36971396, complement)

Chromosome 17 - NC_000083.7Genomic Context describing neighboring genes Neighboring gene CapStarr-seq enhancer MGSCv37_chr17:37095409-37095518 Neighboring gene RNA polymerase I subunit H Neighboring gene RNA polymerase I subunit H, antisense Neighboring gene STARR-seq mESC enhancer starr_42496 Neighboring gene RIKEN cDNA 2410137M14 gene Neighboring gene histocompatibility 2, M region locus 4, pseudogene Neighboring gene histocompatibility 2, M region locus 5 Neighboring gene STARR-seq mESC enhancer starr_42498 Neighboring gene STARR-seq mESC enhancer starr_42499 Neighboring gene zinc finger protein 57

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Active MHC class Ib genes in rat are pseudogenes in the mouse. Lambracht-Washington D, et al. Immunogenetics, 2004 May. PMID 15069589
  2. Physical mapping of the human and mouse MOG gene at the distal end of the MHC class Ib region. Pham-Dinh D, et al. Immunogenetics, 1995. PMID 7590972
  3. Mhc class I and non-class I gene organization in the proximal H2-M region of the mouse. Jones EP, et al. Immunogenetics, 1999 Mar. PMID 9914332
  4. Organization and structure of the H-2M4-M8 class I genes in the mouse major histocompatibility complex. Wang CR, et al. Immunogenetics, 1993. PMID 8319975
  5. Myelin/oligodendrocyte glycoprotein is a member of a subset of the immunoglobulin superfamily encoded within the major histocompatibility complex. Pham-Dinh D, et al. Proc Natl Acad Sci U S A, 1993 Sep 1. PMID 8367453, Free PMC Article

See all (10) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Other Names

  • histocompatibility 2, D region locus 1 pseudogene

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_004708.3 

    Range
    101..2290
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000083.7 Reference GRCm39 C57BL/6J

    Range
    37280099..37282288 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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