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Guca2b guanylate cyclase activator 2b (retina) [ Mus musculus (house mouse) ]

Gene ID: 14916, updated on 11-Apr-2024

Summary

Official Symbol
Guca2bprovided by MGI
Official Full Name
guanylate cyclase activator 2b (retina)provided by MGI
Primary source
MGI:MGI:1270851
See related
Ensembl:ENSMUSG00000032978 AllianceGenome:MGI:1270851
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Ugn; Gcap2
Summary
This gene encodes a member of the guanylin family and preproprotein that is proteolytically processed to generate a mature protein product. The mature protein product, known as uroguanylin, is an endogenous ligand for the guanylate cyclase-C receptor and may regulate salt and water homeostasis in the intestine and kidneys. Homozygous knockout mice for this gene exhibit impaired sodium chloride excretion and elevated arterial pressure. This gene is present in a gene cluster with a related guanylin family member on chromosome 4. [provided by RefSeq, Sep 2015]
Expression
Biased expression in duodenum adult (RPKM 485.9), small intestine adult (RPKM 361.8) and 2 other tissues See more
Orthologs
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Genomic context

Location:
4 D2.1; 4 55.48 cM
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 4 NC_000070.7 (119513798..119516142, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 4 NC_000070.6 (119656601..119658945, complement)

Chromosome 4 - NC_000070.7Genomic Context describing neighboring genes Neighboring gene forkhead box J3 Neighboring gene STARR-seq mESC enhancer starr_11236 Neighboring gene STARR-seq mESC enhancer starr_11239 Neighboring gene guanylate cyclase activator 2a (guanylin) Neighboring gene CapStarr-seq enhancer MGSCv37_chr4:119342138-119342339 Neighboring gene predicted gene, 35761 Neighboring gene predicted gene, 35957

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)

Pathways from PubChem

General gene information

Markers

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables guanylate cyclase activator activity IBA
Inferred from Biological aspect of Ancestor
more info
 
Component Evidence Code Pubs
located_in extracellular region IEA
Inferred from Electronic Annotation
more info
 
located_in photoreceptor outer segment IDA
Inferred from Direct Assay
more info
PubMed 

General protein information

Preferred Names
guanylate cyclase activator 2B
Names
granule cell antiserum positive 2
uroguanylin

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_008191.2NP_032217.2  guanylate cyclase activator 2B preproprotein

    See identical proteins and their annotated locations for NP_032217.2

    Status: REVIEWED

    Source sequence(s)
    AK002364, AL645563, AV003693
    Consensus CDS
    CCDS18587.1
    UniProtKB/Swiss-Prot
    O09051
    UniProtKB/TrEMBL
    Q9QUQ3
    Related
    ENSMUSP00000043203.8, ENSMUST00000044426.8
    Conserved Domains (1) summary
    pfam02058
    Location:22106
    Guanylin; Guanylin precursor

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000070.7 Reference GRCm39 C57BL/6J

    Range
    119513798..119516142 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)