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ACTG1P25 actin gamma 1 pseudogene 25 [ Homo sapiens (human) ]

Gene ID: 148709, updated on 16-Jan-2024

Summary

Official Symbol
ACTG1P25provided by HGNC
Official Full Name
actin gamma 1 pseudogene 25provided by HGNC
Primary source
HGNC:HGNC:54872
See related
Ensembl:ENSG00000293264 AllianceGenome:HGNC:54872
Gene type
pseudo
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
AGPG
Expression
Biased expression in kidney (RPKM 2.2), small intestine (RPKM 0.7) and 6 other tissues See more
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Genomic context

See ACTG1P25 in Genome Data Viewer
Location:
1q32.1
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 1 NC_000001.11 (202861754..202875241)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 1 NC_060925.1 (202124427..202137918)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 1 NC_000001.10 (202830882..202844369)

Chromosome 1 - NC_000001.11Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC124904583 Neighboring gene MGAT4 family member E, pseudogene Neighboring gene H3K27ac hESC enhancer GRCh37_chr1:202807876-202808424 Neighboring gene H3K27ac hESC enhancer GRCh37_chr1:202822155-202822654 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 1708 Neighboring gene tubulin alpha 5, pseudogene Neighboring gene H3K4me1 hESC enhancer GRCh37_chr1:202853813-202854312 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 1709 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 2337 Neighboring gene RAB interacting factor Neighboring gene kelch like family member 12 Neighboring gene heterogeneous nuclear ribonucleoprotein A1 pseudogene 59

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_002929.2 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC098934, AK055809
    Related
    ENST00000456105.2

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000001.11 Reference GRCh38.p14 Primary Assembly

    Range
    202861754..202875241
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060925.1 Alternate T2T-CHM13v2.0

    Range
    202124427..202137918
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)