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ATP5PDP3 ATP synthase peripheral stalk subunit d pseudogene 3 [ Homo sapiens (human) ]

Gene ID: 138864, updated on 10-Oct-2023

Summary

Official Symbol
ATP5PDP3provided by HGNC
Official Full Name
ATP synthase peripheral stalk subunit d pseudogene 3provided by HGNC
Primary source
HGNC:HGNC:49625
See related
Ensembl:ENSG00000213954 AllianceGenome:HGNC:49625
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
ATP5HP3
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Genomic context

See ATP5PDP3 in Genome Data Viewer
Location:
9p23
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 9 NC_000009.12 (14068878..14069480)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 9 NC_060933.1 (14078387..14078989)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 9 NC_000009.11 (14068877..14069479)

Chromosome 9 - NC_000009.12Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC101929507 Neighboring gene pescadillo ribosomal biogenesis factor 1 pseudogene 2 Neighboring gene ribosomal protein L3 pseudogene 11 Neighboring gene nuclear factor I B Neighboring gene H3K27ac hESC enhancer GRCh37_chr9:14204487-14204986 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr9:14238163-14238924 Neighboring gene ribosomal protein L7a pseudogene 47 Neighboring gene Sharpr-MPRA regulatory region 8618 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr9:14273817-14274417 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr9:14274418-14275017 Neighboring gene Sharpr-MPRA regulatory region 4176 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 19774 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr9:14348801-14349300 Neighboring gene NFIB antisense RNA 1 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr9:14355781-14356280

Genomic regions, transcripts, and products

General gene information

Other Names

  • ATP synthase, H+ transporting, mitochondrial Fo complex subunit D pseudogene 3
  • ATP synthase, H+ transporting, mitochondrial Fo complex, subunit d pseudogene
  • ATP synthase, H+ transporting, mitochondrial Fo complex, subunit d, pseudogene 3

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_023175.1 

    Range
    101..703
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000009.12 Reference GRCh38.p14 Primary Assembly

    Range
    14068878..14069480
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060933.1 Alternate T2T-CHM13v2.0

    Range
    14078387..14078989
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)