U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

rcl1 RNA terminal phosphate cyclase-like 1 [ Platichthys flesus (European flounder) ]

Gene ID: 133975146, updated on 29-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
rcl1
Gene description
RNA terminal phosphate cyclase-like 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Platichthys flesus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Carangaria; Pleuronectiformes; Pleuronectoidei; Pleuronectidae; Platichthys
Orthologs
human zebrafish all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See rcl1 in Genome Data Viewer
Location:
chromosome: 19
Exon count:
9
Annotation release Status Assembly Chr Location
RS_2024_01 current fPlaFle2.1 (GCF_949316205.1) 19 NC_084963.1 (6879195..6887716, complement)

Chromosome 19 - NC_084963.1Genomic Context describing neighboring genes Neighboring gene ER degradation-enhancing alpha-mannosidase-like protein 3 Neighboring gene annexin A3b Neighboring gene adenylate kinase 3 Neighboring gene cell division cycle 37-like 1

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_084963.1 Chromosome 19 Reference fPlaFle2.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA endonuclease activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in endonucleolytic cleavage of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in ribosome biogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleolus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
RNA 3'-terminal phosphate cyclase-like protein
Names
RNA 3'-terminal phosphate cyclase-like

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_949316205.1-RS_2024_01

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fPlaFle2.1

Genomic

  1. NC_084963.1 Reference fPlaFle2.1

    Range
    6879195..6887716 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_062413037.1 → XP_062269021.1  RNA 3'-terminal phosphate cyclase-like protein

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.