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Camp cathelicidin antimicrobial peptide [ Mus musculus (house mouse) ]

Gene ID: 12796, updated on 21-Apr-2024

Summary

Official Symbol
Campprovided by MGI
Official Full Name
cathelicidin antimicrobial peptideprovided by MGI
Primary source
MGI:MGI:108443
See related
Ensembl:ENSMUSG00000038357 AllianceGenome:MGI:108443
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
CLP; Cnlp; MCLP; CAP18; Cramp; FALL39
Summary
This gene encodes a member of the cathelicidin family of antimicrobial peptides that play an important role in the defense against microbial infection. The encoded preproprotein undergoes proteolytic processing to generate a mature polypeptide before secretion by host cells such as neutrophils, epithelial cells and macrophages. Mice lacking the encoded protein exhibit increased susceptibility to group A streptococcus and Escherichia coli infections. [provided by RefSeq, Oct 2015]
Expression
Biased expression in liver E18 (RPKM 317.5), liver E14.5 (RPKM 37.3) and 2 other tissues See more
Orthologs
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Genomic context

Location:
9 F2; 9 59.8 cM
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 9 NC_000075.7 (109676445..109678524, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 9 NC_000075.6 (109847377..109849456, complement)

Chromosome 9 - NC_000075.7Genomic Context describing neighboring genes Neighboring gene glyceraldehyde-3-phosphate dehydrogenase pseudogene Neighboring gene NME/NM23 nucleoside diphosphate kinase 6 Neighboring gene STARR-positive B cell enhancer ABC_E9775 Neighboring gene predicted gene, 39427 Neighboring gene STARR-seq mESC enhancer starr_25239 Neighboring gene STARR-positive B cell enhancer ABC_E31 Neighboring gene cell division cycle 25A Neighboring gene microRNA 7089

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Targeted (6)  1 citation
  • Endonuclease-mediated (5) 

Pathways from PubChem

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables lipopolysaccharide binding IBA
Inferred from Biological aspect of Ancestor
more info
 
Process Evidence Code Pubs
involved_in amyloid fibril formation ISO
Inferred from Sequence Orthology
more info
 
involved_in antibacterial humoral response ISO
Inferred from Sequence Orthology
more info
 
involved_in antifungal humoral response ISO
Inferred from Sequence Orthology
more info
 
involved_in antimicrobial humoral immune response mediated by antimicrobial peptide IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in antimicrobial humoral immune response mediated by antimicrobial peptide IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in antimicrobial humoral immune response mediated by antimicrobial peptide ISO
Inferred from Sequence Orthology
more info
 
involved_in chronic inflammatory response ISO
Inferred from Sequence Orthology
more info
 
involved_in cytolysis ISO
Inferred from Sequence Orthology
more info
 
involved_in cytolysis by host of symbiont cells ISO
Inferred from Sequence Orthology
more info
 
involved_in defense response IEA
Inferred from Electronic Annotation
more info
 
involved_in defense response to Gram-negative bacterium IBA
Inferred from Biological aspect of Ancestor
more info
 
acts_upstream_of_or_within defense response to Gram-negative bacterium IDA
Inferred from Direct Assay
more info
PubMed 
involved_in defense response to Gram-negative bacterium IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in defense response to Gram-negative bacterium ISO
Inferred from Sequence Orthology
more info
 
involved_in defense response to Gram-positive bacterium IBA
Inferred from Biological aspect of Ancestor
more info
 
acts_upstream_of_or_within defense response to Gram-positive bacterium IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in defense response to Gram-positive bacterium IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in defense response to Gram-positive bacterium ISO
Inferred from Sequence Orthology
more info
 
acts_upstream_of_or_within defense response to bacterium IMP
Inferred from Mutant Phenotype
more info
PubMed 
acts_upstream_of_or_within defense response to bacterium ISO
Inferred from Sequence Orthology
more info
PubMed 
acts_upstream_of_or_within immune system process IEA
Inferred from Electronic Annotation
more info
 
involved_in innate immune response IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in innate immune response IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in innate immune response ISO
Inferred from Sequence Orthology
more info
 
involved_in innate immune response in mucosa ISO
Inferred from Sequence Orthology
more info
 
acts_upstream_of_or_within killing by host of symbiont cells IMP
Inferred from Mutant Phenotype
more info
PubMed 
acts_upstream_of_or_within killing by host of symbiont cells ISO
Inferred from Sequence Orthology
more info
 
involved_in modulation of process of another organism ISO
Inferred from Sequence Orthology
more info
 
involved_in neutrophil activation ISO
Inferred from Sequence Orthology
more info
 
involved_in positive regulation of angiogenesis ISO
Inferred from Sequence Orthology
more info
 
involved_in positive regulation of cell population proliferation ISO
Inferred from Sequence Orthology
more info
 
involved_in positive regulation of interleukin-8 production ISO
Inferred from Sequence Orthology
more info
 
involved_in positive regulation of protein phosphorylation ISO
Inferred from Sequence Orthology
more info
 
involved_in response to yeast ISO
Inferred from Sequence Orthology
more info
 
Component Evidence Code Pubs
located_in cell projection ISO
Inferred from Sequence Orthology
more info
 
located_in extracellular region IEA
Inferred from Electronic Annotation
more info
 
is_active_in extracellular space IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in extracellular space ISO
Inferred from Sequence Orthology
more info
PubMed 
located_in specific granule IDA
Inferred from Direct Assay
more info
PubMed 
located_in specific granule ISO
Inferred from Sequence Orthology
more info
 

General protein information

Preferred Names
cathelicidin antimicrobial peptide
Names
cathelin-like protein
cathelin-related antimicrobial peptide

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_009921.2NP_034051.2  cathelicidin antimicrobial peptide precursor

    See identical proteins and their annotated locations for NP_034051.2

    Status: REVIEWED

    Source sequence(s)
    BC120754, BY582734, U43409
    Consensus CDS
    CCDS52934.1
    UniProtKB/Swiss-Prot
    P51437, Q0VB78
    UniProtKB/TrEMBL
    Q3TZ97
    Related
    ENSMUSP00000107653.3, ENSMUST00000112022.5
    Conserved Domains (2) summary
    pfam00666
    Location:2995
    Cathelicidins; Cathelicidin
    pfam12153
    Location:140165
    CAP18_C; LPS binding domain of CAP18 (C terminal)

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000075.7 Reference GRCm39 C57BL/6J

    Range
    109676445..109678524 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)