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Cfl2 cofilin 2, muscle [ Mus musculus (house mouse) ]

Gene ID: 12632, updated on 11-Apr-2024

Summary

Official Symbol
Cfl2provided by MGI
Official Full Name
cofilin 2, muscleprovided by MGI
Primary source
MGI:MGI:101763
See related
Ensembl:ENSMUSG00000062929 AllianceGenome:MGI:101763
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Summary
Enables actin filament binding activity. Involved in actin filament fragmentation and skeletal muscle tissue development. Acts upstream of or within actin filament organization; muscle cell cellular homeostasis; and sarcomere organization. Predicted to be located in Z disc. Predicted to be active in actin cytoskeleton and cytoplasm. Is expressed in heart ventricle; limb musculature; myotome; and neural retinal epithelium. Human ortholog(s) of this gene implicated in nemaline myopathy 7. Orthologous to human CFL2 (cofilin 2). [provided by Alliance of Genome Resources, Apr 2022]
Expression
Broad expression in heart adult (RPKM 32.0), bladder adult (RPKM 27.8) and 24 other tissues See more
Orthologs
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Genomic context

See Cfl2 in Genome Data Viewer
Location:
12 C1; 12 23.75 cM
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 12 NC_000078.7 (54905602..54910065, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 12 NC_000078.6 (54858815..54862877, complement)

Chromosome 12 - NC_000078.7Genomic Context describing neighboring genes Neighboring gene predicted gene, 22317 Neighboring gene STARR-seq mESC enhancer starr_32169 Neighboring gene sorting nexin 6 Neighboring gene STARR-positive B cell enhancer ABC_E11511 Neighboring gene STARR-positive B cell enhancer ABC_E10748 Neighboring gene bromodomain adjacent to zinc finger domain 1A Neighboring gene STARR-seq mESC enhancer starr_32173 Neighboring gene STARR-positive B cell enhancer ABC_E9387 Neighboring gene predicted gene, 51983 Neighboring gene predicted gene, 24296

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)

Pathways from PubChem

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables actin binding IEA
Inferred from Electronic Annotation
more info
 
enables actin filament binding IBA
Inferred from Biological aspect of Ancestor
more info
 
enables actin filament binding IDA
Inferred from Direct Assay
more info
PubMed 
Component Evidence Code Pubs
located_in I band ISO
Inferred from Sequence Orthology
more info
 
located_in Z disc ISO
Inferred from Sequence Orthology
more info
 
is_active_in actin cytoskeleton IBA
Inferred from Biological aspect of Ancestor
more info
 
is_active_in cytoplasm IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in cytoskeleton IEA
Inferred from Electronic Annotation
more info
 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_007688.2NP_031714.1  cofilin-2

    See identical proteins and their annotated locations for NP_031714.1

    Status: VALIDATED

    Source sequence(s)
    AC154732
    Consensus CDS
    CCDS36448.1
    UniProtKB/Swiss-Prot
    P45591
    UniProtKB/TrEMBL
    Q3UHW9
    Related
    ENSMUSP00000077262.8, ENSMUST00000078124.8
    Conserved Domains (1) summary
    cd11286
    Location:3153
    ADF_cofilin_like; Cofilin, Destrin, and related actin depolymerizing factors

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000078.7 Reference GRCm39 C57BL/6J

    Range
    54905602..54910065 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006515452.4XP_006515515.1  cofilin-2 isoform X1

    See identical proteins and their annotated locations for XP_006515515.1

    Conserved Domains (1) summary
    cd11286
    Location:10136
    ADF_cofilin_like; Cofilin, Destrin, and related actin depolymerizing factors