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LOC124904756 U7 small nuclear RNA [ Homo sapiens (human) ]

Gene ID: 124904756, updated on 10-Oct-2023

Summary

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Gene symbol
LOC124904756
Gene description
U7 small nuclear RNA
See related
Ensembl:ENSG00000273629
Gene type
snRNA
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

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Location:
1q25.2
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 1 NC_000001.11 (176217541..176217602)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 1 NC_060925.1 (175572794..175572855)

Chromosome 1 - NC_000001.11Genomic Context describing neighboring genes Neighboring gene ReSE screen-validated silencer GRCh37_chr1:175892848-175893023 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr1:175903651-175904515 Neighboring gene NANOG-H3K27ac hESC enhancer GRCh37_chr1:175905380-175906244 Neighboring gene H3K27ac hESC enhancer GRCh37_chr1:175906245-175907107 Neighboring gene ribosomal protein S29 pseudogene 5 Neighboring gene COP1 E3 ubiquitin ligase Neighboring gene microRNA 1843 Neighboring gene small Cajal body-specific RNA 3 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr1:175976701-175977202 Neighboring gene MPRA-validated peak473 silencer Neighboring gene H3K4me1 hESC enhancer GRCh37_chr1:176065569-176066068 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 1569 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 1570 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 2140 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr1:176193870-176194506 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr1:176194507-176195142 Neighboring gene NANOG hESC enhancer GRCh37_chr1:176196158-176197147 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr1:176198991-176199490 Neighboring gene COP1 divergent transcript Neighboring gene ribosomal protein L13 pseudogene 7 Neighboring gene RNA, U2 small nuclear 12, pseudogene

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000001.11 Reference GRCh38.p14 Primary Assembly

    Range
    176217541..176217602
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007067324.1 RNA Sequence

    Related
    ENST00000616123.1

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060925.1 Alternate T2T-CHM13v2.0

    Range
    175572794..175572855
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007071438.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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