U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC124902439 uncharacterized LOC124902439 [ Homo sapiens (human) ]

Gene ID: 124902439, updated on 10-Oct-2023

Summary

Go to the top of the page Help
Gene symbol
LOC124902439
Gene description
uncharacterized LOC124902439
See related
Ensembl:ENSG00000228566
Gene type
ncRNA
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
10q21.3
Exon count:
18
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 10 NC_000010.11 (63872589..64692939)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 10 NC_060934.1 (64730315..65551772)

Chromosome 10 - NC_000010.11Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC107984238 Neighboring gene uncharacterized LOC101929846 Neighboring gene uncharacterized LOC124902438 Neighboring gene Sharpr-MPRA regulatory region 9763 Neighboring gene H3K4me1 hESC enhancers GRCh37_chr10:65444405-65444906 and GRCh37_chr10:65444907-65445406 Neighboring gene P300/CBP strongly-dependent group 1 enhancer GRCh37_chr10:65466673-65467872 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr10:65473036-65473714 Neighboring gene MPRA-validated peak967 silencer Neighboring gene uncharacterized LOC101928859 Neighboring gene ribosomal protein L7a pseudogene 50 Neighboring gene nuclear pore associated protein 1 pseudogene Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 2412 Neighboring gene uncharacterized LOC105378333 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 3445 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 3446 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 3447 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 3448 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr10:65801475-65801975 Neighboring gene Sharpr-MPRA regulatory region 2403 Neighboring gene Sharpr-MPRA regulatory region 9742 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr10:65880319-65880911 Neighboring gene DBF4 pseudogene 1 Neighboring gene Sharpr-MPRA regulatory region 9231 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr10:66144462-66145292 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr10:66145293-66146122 Neighboring gene MPRA-validated peak969 silencer Neighboring gene NANOG hESC enhancer GRCh37_chr10:66266441-66266965 Neighboring gene uncharacterized LOC105378335 Neighboring gene MPRA-validated peak971 silencer Neighboring gene MPRA-validated peak972 silencer Neighboring gene ribosomal protein L17 pseudogene 35 Neighboring gene uncharacterized LOC107984239 Neighboring gene Sharpr-MPRA regulatory region 14987 Neighboring gene MPRA-validated peak974 silencer Neighboring gene MPRA-validated peak975 silencer Neighboring gene H3K27ac hESC enhancer GRCh37_chr10:66569879-66570556 Neighboring gene uncharacterized LOC105378336 Neighboring gene cytochrome P450 family 2 subfamily C member 61, pseudogene Neighboring gene annexin A2 pseudogene 3

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

Phenotypes

Go to the top of the page Help

Review eQTL and phenotype association data in this region using PheGenI

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000010.11 Reference GRCh38.p14 Primary Assembly

    Range
    63872589..64692939
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007062161.1 RNA Sequence

    Related
    ENST00000654191.1

  2. XR_007062160.1 RNA Sequence

  3. XR_007062164.1 RNA Sequence

  4. XR_007062162.1 RNA Sequence

  5. XR_007062159.1 RNA Sequence

  6. XR_007062163.1 RNA Sequence

  7. XR_007062166.1 RNA Sequence

  8. XR_007062165.1 RNA Sequence

  9. XR_007062167.1 RNA Sequence

  10. XR_007062168.1 RNA Sequence

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060934.1 Alternate T2T-CHM13v2.0

    Range
    64730315..65551772
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007081353.1 RNA Sequence

  2. XR_007081351.1 RNA Sequence

  3. XR_007081350.1 RNA Sequence

  4. XR_007081354.1 RNA Sequence

  5. XR_007081352.1 RNA Sequence

  6. XR_007081355.1 RNA Sequence

  7. XR_007081349.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Other Literature Sources
Molecular Biology Databases