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LOC124900589 small nucleolar RNA SNORD79 [ Homo sapiens (human) ]

Gene ID: 124900589, updated on 10-Oct-2023

Summary

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Gene symbol
LOC124900589
Gene description
small nucleolar RNA SNORD79
Gene type
snoRNA
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Annotation information
Annotation category: not annotated on reference assembly
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Genomic context

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Location:
chromosome: 4
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 4 NC_060928.1 (187775787..187775870)

Chromosome 4 - NC_060928.1Genomic Context describing neighboring genes Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 15835 Neighboring gene Sharpr-MPRA regulatory region 724 Neighboring gene long intergenic non-protein coding RNA 2363 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 22213 Neighboring gene long intergenic non-protein coding RNA 2362 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 22214 Neighboring gene CDK7 strongly-dependent group 2 enhancer GRCh37_chr4:185304232-185305431 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr4:185307527-185308285 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr4:185310291-185311024 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr4:185311025-185311758 Neighboring gene ReSE screen-validated silencer GRCh37_chr4:185314606-185314781 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 22215 Neighboring gene interferon regulatory factor 2 Neighboring gene Sharpr-MPRA regulatory region 12125 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 22216 Neighboring gene MED14-independent group 3 enhancer GRCh37_chr4:185339175-185340374 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr4:185351299-185351950 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr4:185351951-185352602 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 22218 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 22219 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 22220 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 15836 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 15837 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 15838 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 15839 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 22221 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 22222 Neighboring gene IRF2 divergent transcript Neighboring gene CDK7 strongly-dependent group 2 enhancer GRCh37_chr4:185424979-185426178 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 22225 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 22226 Neighboring gene long intergenic non-protein coding RNA 2427 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 22227 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 22228 Neighboring gene NANOG hESC enhancer GRCh37_chr4:185450344-185450869 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 22229

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_060928.1 Chromosome 4 Alternate T2T-CHM13v2.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060928.1 Alternate T2T-CHM13v2.0

    Range
    187775787..187775870
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007075385.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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