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LOC124900363 small nucleolar RNA SNORA48 [ Homo sapiens (human) ]

Gene ID: 124900363, updated on 10-Oct-2023

Summary

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Gene symbol
LOC124900363
Gene description
small nucleolar RNA SNORA48
See related
Ensembl:ENSG00000212604
Gene type
snoRNA
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

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See LOC124900363 in Genome Data Viewer
Location:
15q12
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 15 NC_000015.10 (26008940..26009074, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 15 NC_060939.1 (23749381..23749515, complement)

Chromosome 15 - NC_000015.10Genomic Context describing neighboring genes Neighboring gene ATP10A divergent transcript Neighboring gene H3K27ac hESC enhancer GRCh37_chr15:26143028-26143528 Neighboring gene H3K27ac hESC enhancer GRCh37_chr15:26143529-26144029 Neighboring gene long intergenic non-protein coding RNA 2346 Neighboring gene NANOG-H3K4me1 hESC enhancer GRCh37_chr15:26175613-26176114 Neighboring gene NANOG-H3K4me1 hESC enhancer GRCh37_chr15:26176115-26176614 Neighboring gene MRPS18C pseudogene 5 Neighboring gene H3K27ac hESC enhancer GRCh37_chr15:26187987-26188487 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 6266 Neighboring gene tRNA-Glu (anticodon TTC) 2-2 Neighboring gene uncharacterized LOC105370739 Neighboring gene Sharpr-MPRA regulatory region 9219 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr15:26371289-26371981 Neighboring gene long intergenic non-protein coding RNA 929 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr15:26375077-26375665

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000015.10 Reference GRCh38.p14 Primary Assembly

    Range
    26008940..26009074 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007064813.1 RNA Sequence

    Related
    ENST00000391302.1

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060939.1 Alternate T2T-CHM13v2.0

    Range
    23749381..23749515 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007086028.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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