U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LINC02954 long intergenic non-protein coding RNA 2954 [ Homo sapiens (human) ]

Gene ID: 123466205, updated on 26-Oct-2023

Summary

Go to the top of the page Help
Official Symbol
LINC02954provided by HGNC
Official Full Name
long intergenic non-protein coding RNA 2954provided by HGNC
Primary source
HGNC:HGNC:55972
See related
Ensembl:ENSG00000256733
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
11q12.2
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 11 NC_000011.10 (61055391..61067597)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 11 NC_060935.1 (61006579..61018785)

Chromosome 11 - NC_000011.10Genomic Context describing neighboring genes Neighboring gene CD6 molecule Neighboring gene tRNA-Ala (TGC) 10-1 Neighboring gene uncharacterized LOC105369326 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr11:60774736-60775444 Neighboring gene NANOG-H3K4me1 hESC enhancer GRCh37_chr11:60779887-60780476 Neighboring gene NANOG-H3K4me1 hESC enhancer GRCh37_chr11:60780477-60781066 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 4789 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr11:60793655-60794220 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 3384 Neighboring gene uncharacterized LOC105369325 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr11:60824202-60824702 Neighboring gene P300/CBP strongly-dependent group 1 enhancer GRCh37_chr11:60828388-60829587 Neighboring gene uncharacterized LOC124902677 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 4792 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr11:60859431-60860393 Neighboring gene CD5 molecule

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

Phenotypes

Go to the top of the page Help

Review eQTL and phenotype association data in this region using PheGenI

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_186234.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AP003721
    Related
    ENST00000659437.1

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000011.10 Reference GRCh38.p14 Primary Assembly

    Range
    61055391..61067597
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060935.1 Alternate T2T-CHM13v2.0

    Range
    61006579..61018785
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases