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TRPC6P7 TRPC6 pseudogene 7 [ Homo sapiens (human) ]

Gene ID: 123464511, updated on 10-Oct-2023

Summary

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Official Symbol
TRPC6P7provided by HGNC
Official Full Name
TRPC6 pseudogene 7provided by HGNC
Primary source
HGNC:HGNC:55948
See related
Ensembl:ENSG00000251147
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

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Location:
4q35.1
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 4 NC_000004.12 (184910889..184911352, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 4 NC_060928.1 (188254433..188254896, complement)

Chromosome 4 - NC_000004.12Genomic Context describing neighboring genes Neighboring gene MIR3945 host gene Neighboring gene microRNA 3945 Neighboring gene PATRR4 recombination region Neighboring gene CDK7 strongly-dependent group 2 enhancer GRCh37_chr4:185814744-185815943 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 22244 Neighboring gene long intergenic non-protein coding RNA 1093 Neighboring gene Sharpr-MPRA regulatory region 4878 Neighboring gene microRNA 4455 Neighboring gene ReSE screen-validated silencer GRCh37_chr4:185878684-185878847 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr4:185882462-185882962 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr4:185882963-185883463 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr4:185886653-185887153 Neighboring gene Sharpr-MPRA regulatory region 11336 Neighboring gene long intergenic non-protein coding RNA 2437 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 22245

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

General gene information

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NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_084040.1 

    Range
    101..564
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000004.12 Reference GRCh38.p14 Primary Assembly

    Range
    184910889..184911352 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060928.1 Alternate T2T-CHM13v2.0

    Range
    188254433..188254896 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases