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LINC02927 long intergenic non-protein coding RNA 2927 [ Homo sapiens (human) ]

Gene ID: 122149304, updated on 26-Oct-2023

Summary

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Official Symbol
LINC02927provided by HGNC
Official Full Name
long intergenic non-protein coding RNA 2927provided by HGNC
Primary source
HGNC:HGNC:55778
See related
Ensembl:ENSG00000230153
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

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Location:
Xq28
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) X NC_000023.11 (150917202..150920938)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) X NC_060947.1 (149184830..149188546)

Chromosome X - NC_000023.11Genomic Context describing neighboring genes Neighboring gene CD99 molecule like 2 Neighboring gene peptidylprolyl isomerase A pseudogene 91 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 30025 Neighboring gene H3K4me1 hESC enhancer GRCh37_chrX:150058782-150059282 Neighboring gene H3K4me1 hESC enhancer GRCh37_chrX:150059283-150059783 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 21054 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chrX:150070302-150070988 Neighboring gene uncharacterized LOC124905297 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chrX:150070989-150071673 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chrX:150071674-150072359 Neighboring gene H3K27ac hESC enhancer GRCh37_chrX:150093760-150094594 Neighboring gene RNA, U6 small nuclear 383, pseudogene Neighboring gene H3K4me1 hESC enhancer GRCh37_chrX:150136026-150136543 Neighboring gene H3K27ac hESC enhancer GRCh37_chrX:150150822-150151517 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 21055 Neighboring gene high mobility group box 3

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See variants in ClinVar

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_186570.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AF003626, AF274573
    Related
    ENST00000424539.1

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000023.11 Reference GRCh38.p14 Primary Assembly

    Range
    150917202..150920938
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060947.1 Alternate T2T-CHM13v2.0

    Range
    149184830..149188546
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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