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PSMA6P4 proteasome subunit alpha 6 pseudogene 4 [ Homo sapiens (human) ]

Gene ID: 121906, updated on 10-Oct-2023

Summary

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Official Symbol
PSMA6P4provided by HGNC
Official Full Name
proteasome subunit alpha 6 pseudogene 4provided by HGNC
Primary source
HGNC:HGNC:39609
See related
AllianceGenome:HGNC:39609
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

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Location:
13q32.1
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 13 NC_000013.11 (97475703..97476631)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 13 NC_060937.1 (96682019..96682947)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 13 NC_000013.10 (98127957..98128885)

Chromosome 13 - NC_000013.11Genomic Context describing neighboring genes Neighboring gene muscleblind like splicing regulator 2 Neighboring gene RNA, 5S ribosomal pseudogene 37 Neighboring gene H3K27ac hESC enhancer GRCh37_chr13:98085607-98086538 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 5452 Neighboring gene ReSE screen-validated silencer GRCh37_chr13:98090451-98090644 Neighboring gene NANOG hESC enhancer GRCh37_chr13:98101035-98101536 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 7892 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 7893 Neighboring gene RAP2A, member of RAS oncogene family Neighboring gene uncharacterized LOC105370324 Neighboring gene uncharacterized LOC105370325 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 7894 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr13:98274135-98274634 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr13:98294424-98294945 Neighboring gene OCT4-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr13:98325433-98326040 Neighboring gene MED14-independent group 3 enhancer GRCh37_chr13:98381876-98383075 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 7895 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 7896 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 7897 Neighboring gene small nucleolar RNA U13

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

General gene information

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Markers

Other Names

  • proteasome (prosome, macropain) subunit, alpha type, 6 pseudogene 4

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_023173.2 

    Range
    101..1029
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000013.11 Reference GRCh38.p14 Primary Assembly

    Range
    97475703..97476631
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060937.1 Alternate T2T-CHM13v2.0

    Range
    96682019..96682947
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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