U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

SLCO5A1-AS1 SLCO5A1 antisense RNA 1 [ Homo sapiens (human) ]

Gene ID: 121233925, updated on 25-Oct-2023

Summary

Go to the top of the page Help
Official Symbol
SLCO5A1-AS1provided by HGNC
Official Full Name
SLCO5A1 antisense RNA 1provided by HGNC
Primary source
HGNC:HGNC:55595
See related
Ensembl:ENSG00000246528
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See SLCO5A1-AS1 in Genome Data Viewer
Location:
8q13.3
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 8 NC_000008.11 (69834112..69854966)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 8 NC_060932.1 (70263698..70284549)

Chromosome 8 - NC_000008.11Genomic Context describing neighboring genes Neighboring gene solute carrier organic anion transporter family member 5A1 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr8:70623385-70623885 Neighboring gene uncharacterized LOC105375889 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 19263 Neighboring gene Sharpr-MPRA regulatory region 147 Neighboring gene TMX1 pseudogene 2 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 19264 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 27500 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 27501 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 19265 Neighboring gene BAG cochaperone 4 pseudogene Neighboring gene RNA, 7SL, cytoplasmic 675, pseudogene

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

Phenotypes

Go to the top of the page Help

Review eQTL and phenotype association data in this region using PheGenI

Variation

Go to the top of the page Help

See variants in ClinVar

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_186558.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC079089
    Related
    ENST00000501104.3

  2. NR_186564.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC079089

  3. NR_186565.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC079089
    Related
    ENST00000528800.4

  4. NR_186566.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC079089

  5. NR_186567.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC079089

  6. NR_186568.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC079089
    Related
    ENST00000530194.1

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000008.11 Reference GRCh38.p14 Primary Assembly

    Range
    69834112..69854966
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060932.1 Alternate T2T-CHM13v2.0

    Range
    70263698..70284549
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases