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MAD2L1-DT MAD2L1 divergent transcript [ Homo sapiens (human) ]

Gene ID: 121009649, updated on 10-Oct-2023

Summary

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Official Symbol
MAD2L1-DTprovided by HGNC
Official Full Name
MAD2L1 divergent transcriptprovided by HGNC
Primary source
HGNC:HGNC:55546
See related
AllianceGenome:HGNC:55546
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

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See MAD2L1-DT in Genome Data Viewer
Location:
4q27
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 4 NC_000004.12 (120066958..120167204)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 4 NC_060928.1 (123371055..123471304)

Chromosome 4 - NC_000004.12Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC124900770 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 21858 Neighboring gene H3K27ac hESC enhancer GRCh37_chr4:120987074-120987580 Neighboring gene H3K27ac hESC enhancer GRCh37_chr4:120987581-120988086 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 21860 Neighboring gene mitotic arrest deficient 2 like 1 Neighboring gene LTV1 ribosome biogenesis factor pseudogene 1 Neighboring gene ReSE screen-validated silencer GRCh37_chr4:121118839-121118995 Neighboring gene secretion associated Ras related GTPase 1A pseudogene 3 Neighboring gene uncharacterized LOC124900771

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See variants in ClinVar

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_187429.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC025237, AC097173, AC108866

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000004.12 Reference GRCh38.p14 Primary Assembly

    Range
    120066958..120167204
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Reference GRCh38.p14 ALT_REF_LOCI_1

Genomic

  1. NT_187544.1 Reference GRCh38.p14 ALT_REF_LOCI_1

    Range
    1261..3006
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060928.1 Alternate T2T-CHM13v2.0

    Range
    123371055..123471304
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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