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Bcl2a1b B cell leukemia/lymphoma 2 related protein A1b [ Mus musculus (house mouse) ]

Gene ID: 12045, updated on 11-Apr-2024

Summary

Official Symbol
Bcl2a1bprovided by MGI
Official Full Name
B cell leukemia/lymphoma 2 related protein A1bprovided by MGI
Primary source
MGI:MGI:1278326
See related
Ensembl:ENSMUSG00000089929 AllianceGenome:MGI:1278326
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
A1-b
Summary
Predicted to enable protein heterodimerization activity and protein homodimerization activity. Predicted to be involved in extrinsic apoptotic signaling pathway in absence of ligand and intrinsic apoptotic signaling pathway in response to DNA damage. Predicted to be active in mitochondrial outer membrane. Is expressed in craniocervical region bone; hemolymphoid system; musculature; and respiratory system. Orthologous to human BCL2A1 (BCL2 related protein A1). [provided by Alliance of Genome Resources, Apr 2022]
Expression
Broad expression in spleen adult (RPKM 7.7), thymus adult (RPKM 5.5) and 20 other tissues See more
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Genomic context

Location:
9 E3.1; 9 47.24 cM
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 9 NC_000075.7 (89081326..89089891)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 9 NC_000075.6 (89199273..89207838)

Chromosome 9 - NC_000075.7Genomic Context describing neighboring genes Neighboring gene RIKEN cDNA 4930579C12 gene Neighboring gene STARR-seq mESC enhancer starr_24869 Neighboring gene predicted gene, 26423 Neighboring gene predicted gene, 40544 Neighboring gene STARR-positive B cell enhancer mm9_chr9:89090619-89090919 Neighboring gene STARR-positive B cell enhancer ABC_E6785 Neighboring gene STARR-positive B cell enhancer ABC_E8305 Neighboring gene STARR-positive B cell enhancer ABC_E11418 Neighboring gene 5, 10-methenyltetrahydrofolate synthetase Neighboring gene STARR-seq mESC enhancer starr_24872 Neighboring gene STARR-seq mESC enhancer starr_24873 Neighboring gene predicted gene, 40543

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)

General gene information

Markers

Potential readthrough

Included gene: Mthfs

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables BH domain binding IBA
Inferred from Biological aspect of Ancestor
more info
 
enables BH domain binding ISO
Inferred from Sequence Orthology
more info
 
enables channel activity IBA
Inferred from Biological aspect of Ancestor
more info
 
enables protein-containing complex binding ISO
Inferred from Sequence Orthology
more info
 
Process Evidence Code Pubs
involved_in activation of cysteine-type endopeptidase activity involved in apoptotic process IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in extrinsic apoptotic signaling pathway in absence of ligand IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in intrinsic apoptotic signaling pathway in response to DNA damage IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in mitochondrial fusion IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in release of cytochrome c from mitochondria IBA
Inferred from Biological aspect of Ancestor
more info
 
Component Evidence Code Pubs
located_in cytoplasm ISO
Inferred from Sequence Orthology
more info
 
is_active_in mitochondrial outer membrane IBA
Inferred from Biological aspect of Ancestor
more info
 

General protein information

Preferred Names
B-cell leukemia/lymphoma 2 related protein A1b
Names
anti-apoptotic protein A1-b

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_007534.3NP_031560.2  B-cell leukemia/lymphoma 2 related protein A1b

    See identical proteins and their annotated locations for NP_031560.2

    Status: VALIDATED

    Source sequence(s)
    BC100462, CT030686
    Consensus CDS
    CCDS23393.1
    UniProtKB/TrEMBL
    O55177, Q497M6, Q4FK02
    Related
    ENSMUSP00000065612.5, ENSMUST00000068569.5
    Conserved Domains (1) summary
    smart00337
    Location:37140
    BCL; BCL (B-Cell lymphoma); contains BH1, BH2 regions

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000075.7 Reference GRCm39 C57BL/6J

    Range
    89081326..89089891
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)