U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

BTF3-DT BTF3 divergent transcript [ Homo sapiens (human) ]

Gene ID: 118568828, updated on 26-Oct-2023

Summary

Go to the top of the page Help
Official Symbol
BTF3-DTprovided by HGNC
Official Full Name
BTF3 divergent transcriptprovided by HGNC
Primary source
HGNC:HGNC:55211
See related
Ensembl:ENSG00000272525
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
5q13.2
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 5 NC_000005.10 (73497553..73498320, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 5 NC_060929.1 (73978876..73979643, complement)

Chromosome 5 - NC_000005.10Genomic Context describing neighboring genes Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 16088 Neighboring gene forkhead box D1 Neighboring gene long intergenic non-protein coding RNA 1386 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr5:72783409-72784169 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 22657 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr5:72794255-72795065 Neighboring gene basic transcription factor 3 Neighboring gene FUN14 domain containing 2 pseudogene 1

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

Phenotypes

Go to the top of the page Help

Review eQTL and phenotype association data in this region using PheGenI

Variation

Go to the top of the page Help

See variants in ClinVar

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_186388.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC099522
    Related
    ENST00000607001.2

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000005.10 Reference GRCh38.p14 Primary Assembly

    Range
    73497553..73498320 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060929.1 Alternate T2T-CHM13v2.0

    Range
    73978876..73979643 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases