U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

WDR5-DT WDR5 divergent transcript [ Homo sapiens (human) ]

Gene ID: 118568806, updated on 10-Oct-2023

Summary

Go to the top of the page Help
Official Symbol
WDR5-DTprovided by HGNC
Official Full Name
WDR5 divergent transcriptprovided by HGNC
Primary source
HGNC:HGNC:55141
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
9q34.2
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 9 NC_000009.12 (134131450..134135982, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 9 NC_060933.1 (146345200..146349717, complement)

Chromosome 9 - NC_000009.12Genomic Context describing neighboring genes Neighboring gene bromodomain containing 3 Neighboring gene uncharacterized LOC100130548 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr9:136924735-136925476 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr9:136927711-136928622 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 20474 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 20475 Neighboring gene NANOG-H3K27ac hESC enhancer GRCh37_chr9:136956997-136957776 Neighboring gene NANOG-H3K27ac hESC enhancer GRCh37_chr9:136957777-136958556 Neighboring gene ADP ribosylation factor 4 pseudogene 1 Neighboring gene MPRA-validated peak7340 silencer Neighboring gene H3K4me1 hESC enhancer GRCh37_chr9:136991223-136992104 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr9:136992105-136992986 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr9:136994027-136994872 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr9:136994873-136995716 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr9:136997435-136998004 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 29270 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 20476 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr9:137001261-137002185 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr9:137016988-137017508 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr9:137017509-137018028 Neighboring gene WD repeat domain 5 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr9:137028703-137029668 Neighboring gene uncharacterized LOC124902297 Neighboring gene RNA, U6atac small nuclear Neighboring gene uncharacterized LOC124902298 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 29272 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 29273 Neighboring gene H3K27ac hESC enhancer GRCh37_chr9:137095569-137096070 Neighboring gene H3K27ac hESC enhancer GRCh37_chr9:137096071-137096570

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

Phenotypes

Go to the top of the page Help

Review eQTL and phenotype association data in this region using PheGenI

Variation

Go to the top of the page Help

See variants in ClinVar

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_186420.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    BX649632

  2. NR_186421.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    BX649632

  3. NR_186422.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    BX649632

  4. NR_186423.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    BX649632

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000009.12 Reference GRCh38.p14 Primary Assembly

    Range
    134131450..134135982 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060933.1 Alternate T2T-CHM13v2.0

    Range
    146345200..146349717 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials