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C3orf49P1 C3orf49 pseudogene 1 [ Homo sapiens (human) ]

Gene ID: 117981798, updated on 10-Oct-2023

Summary

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Official Symbol
C3orf49P1provided by HGNC
Official Full Name
C3orf49 pseudogene 1provided by HGNC
Primary source
HGNC:HGNC:55036
See related
AllianceGenome:HGNC:55036
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

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Location:
Xq22.1
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) X NC_000023.11 (102006653..102007294)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) X NC_060947.1 (100451253..100451894)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) X NC_000023.10 (101261626..101262267)

Chromosome X - NC_000023.11Genomic Context describing neighboring genes Neighboring gene zinc finger matrin-type 1 Neighboring gene RNA, U6 small nuclear 345, pseudogene Neighboring gene H3K27ac hESC enhancer GRCh37_chrX:101186779-101187279 Neighboring gene H3K4me1 hESC enhancer GRCh37_chrX:101254554-101255054 Neighboring gene H3K4me1 hESC enhancer GRCh37_chrX:101255055-101255555 Neighboring gene H2B histone pseudogene 8 Neighboring gene MT-ND6 pseudogene 13 Neighboring gene transcription elongation factor A like 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See Variation Viewer (GRCh37.p13)

General gene information

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NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_070713.1 

    Range
    101..742
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    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000023.11 Reference GRCh38.p14 Primary Assembly

    Range
    102006653..102007294
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060947.1 Alternate T2T-CHM13v2.0

    Range
    100451253..100451894
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

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