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Agrn agrin [ Mus musculus (house mouse) ]

Gene ID: 11603, updated on 31-Mar-2024

Summary

Official Symbol
Agrnprovided by MGI
Official Full Name
agrinprovided by MGI
Primary source
MGI:MGI:87961
See related
Ensembl:ENSMUSG00000041936 AllianceGenome:MGI:87961
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Agrin; nmf380
Summary
Enables several functions, including chondroitin sulfate binding activity; heparan sulfate proteoglycan binding activity; and transmembrane transporter binding activity. Involved in several processes, including negative regulation of sodium ion transmembrane transport; positive regulation of protein modification process; and positive regulation of synaptic assembly at neuromuscular junction. Acts upstream of or within several processes, including neurotransmitter receptor metabolic process; positive regulation of neuron apoptotic process; and regulation of synaptic assembly at neuromuscular junction. Located in several cellular components, including basement membrane; sarcolemma; and synaptic cleft. Is expressed in several structures, including lower jaw; metanephros; musculature; nervous system; and retina. Used to study congenital myasthenic syndrome 8. Human ortholog(s) of this gene implicated in congenital myasthenic syndrome 8. Orthologous to human AGRN (agrin). [provided by Alliance of Genome Resources, Apr 2022]
Expression
Ubiquitous expression in whole brain E14.5 (RPKM 86.1), CNS E14 (RPKM 82.7) and 27 other tissues See more
Orthologs
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Genomic context

Location:
4 E2; 4 88.55 cM
Exon count:
44
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 4 NC_000070.7 (156249747..156281997, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 4 NC_000070.6 (156165290..156197533, complement)

Chromosome 4 - NC_000070.7Genomic Context describing neighboring genes Neighboring gene RIKEN cDNA 9430015G10 gene Neighboring gene STARR-positive B cell enhancer ABC_E1672 Neighboring gene ring finger 223 Neighboring gene STARR-seq mESC enhancer starr_12288 Neighboring gene STARR-seq mESC enhancer starr_12289 Neighboring gene STARR-seq mESC enhancer starr_12290 Neighboring gene STARR-seq mESC enhancer starr_12291 Neighboring gene predicted gene, 46878 Neighboring gene STARR-positive B cell enhancer ABC_E2735 Neighboring gene expressed sequence AW011738 Neighboring gene ISG15 ubiquitin-like modifier Neighboring gene PPARGC1 and ESRR induced regulator, muscle 1

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Gene trapped (1)  1 citation
  • Targeted (6)  1 citation
  • Chemically induced (ENU) (1) 
  • Endonuclease-mediated (2) 

Pathways from PubChem

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables ATPase inhibitor activity IDA
Inferred from Direct Assay
more info
PubMed 
enables BMP binding ISO
Inferred from Sequence Orthology
more info
 
enables acetylcholine receptor regulator activity IDA
Inferred from Direct Assay
more info
PubMed 
enables calcium ion binding ISO
Inferred from Sequence Orthology
more info
 
enables chondroitin sulfate binding IDA
Inferred from Direct Assay
more info
PubMed 
enables dystroglycan binding ISO
Inferred from Sequence Orthology
more info
 
enables extracellular matrix structural constituent RCA
inferred from Reviewed Computational Analysis
more info
PubMed 
enables heparan sulfate proteoglycan binding IDA
Inferred from Direct Assay
more info
PubMed 
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
 
enables protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
enables receptor ligand activity IDA
Inferred from Direct Assay
more info
PubMed 
enables transforming growth factor beta binding ISO
Inferred from Sequence Orthology
more info
 
enables transmembrane transporter binding IPI
Inferred from Physical Interaction
more info
PubMed 
Process Evidence Code Pubs
acts_upstream_of_or_within behavior IGI
Inferred from Genetic Interaction
more info
PubMed 
acts_upstream_of_or_within cell differentiation IEA
Inferred from Electronic Annotation
more info
 
acts_upstream_of_or_within chemical synaptic transmission IDA
Inferred from Direct Assay
more info
PubMed 
involved_in chemical synaptic transmission ISO
Inferred from Sequence Orthology
more info
 
acts_upstream_of_or_within circadian rhythm IGI
Inferred from Genetic Interaction
more info
PubMed 
involved_in enzyme-linked receptor protein signaling pathway IDA
Inferred from Direct Assay
more info
PubMed 
involved_in enzyme-linked receptor protein signaling pathway IGI
Inferred from Genetic Interaction
more info
PubMed 
involved_in enzyme-linked receptor protein signaling pathway IMP
Inferred from Mutant Phenotype
more info
PubMed 
acts_upstream_of motor neuron apoptotic process IMP
Inferred from Mutant Phenotype
more info
PubMed 
acts_upstream_of_or_within multicellular organism development IEA
Inferred from Electronic Annotation
more info
 
involved_in negative regulation of P-type sodium:potassium-exchanging transporter activity IDA
Inferred from Direct Assay
more info
PubMed 
involved_in negative regulation of sodium ion export across plasma membrane IDA
Inferred from Direct Assay
more info
PubMed 
involved_in neuromuscular junction development IBA
Inferred from Biological aspect of Ancestor
more info
 
acts_upstream_of_or_within neuromuscular junction development IGI
Inferred from Genetic Interaction
more info
PubMed 
acts_upstream_of_or_within plasma membrane organization IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in positive regulation of Rac protein signal transduction IDA
Inferred from Direct Assay
more info
PubMed 
involved_in positive regulation of Rac protein signal transduction IGI
Inferred from Genetic Interaction
more info
PubMed 
involved_in positive regulation of filopodium assembly ISO
Inferred from Sequence Orthology
more info
 
acts_upstream_of_or_within positive regulation of motor neuron apoptotic process IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in positive regulation of peptidyl-tyrosine phosphorylation ISO
Inferred from Sequence Orthology
more info
 
involved_in positive regulation of protein binding IDA
Inferred from Direct Assay
more info
PubMed 
involved_in positive regulation of protein geranylgeranylation IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in positive regulation of protein phosphorylation IDA
Inferred from Direct Assay
more info
PubMed 
involved_in positive regulation of protein phosphorylation ISO
Inferred from Sequence Orthology
more info
 
involved_in positive regulation of protein tyrosine kinase activity IDA
Inferred from Direct Assay
more info
PubMed 
involved_in positive regulation of skeletal muscle acetylcholine-gated channel clustering IDA
Inferred from Direct Assay
more info
PubMed 
involved_in positive regulation of skeletal muscle acetylcholine-gated channel clustering IGI
Inferred from Genetic Interaction
more info
PubMed 
involved_in positive regulation of skeletal muscle acetylcholine-gated channel clustering IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in positive regulation of synaptic assembly at neuromuscular junction IMP
Inferred from Mutant Phenotype
more info
PubMed 
acts_upstream_of_or_within positive regulation of transcription by RNA polymerase II IDA
Inferred from Direct Assay
more info
PubMed 
involved_in positive regulation of transcription by RNA polymerase II ISO
Inferred from Sequence Orthology
more info
 
acts_upstream_of_or_within protein transport IDA
Inferred from Direct Assay
more info
PubMed 
involved_in receptor clustering IBA
Inferred from Biological aspect of Ancestor
more info
 
acts_upstream_of_or_within receptor clustering IDA
Inferred from Direct Assay
more info
PubMed 
acts_upstream_of_or_within receptor clustering IGI
Inferred from Genetic Interaction
more info
PubMed 
acts_upstream_of_or_within receptor clustering IMP
Inferred from Mutant Phenotype
more info
PubMed 
acts_upstream_of_or_within receptor clustering ISO
Inferred from Sequence Orthology
more info
 
involved_in receptor clustering ISO
Inferred from Sequence Orthology
more info
 
involved_in regulation of GTPase activity IDA
Inferred from Direct Assay
more info
PubMed 
involved_in regulation of axon guidance ISO
Inferred from Sequence Orthology
more info
 
involved_in regulation of cardiac muscle cell membrane potential IDA
Inferred from Direct Assay
more info
PubMed 
involved_in regulation of cardiac muscle contraction IDA
Inferred from Direct Assay
more info
PubMed 
involved_in regulation of microtubule cytoskeleton organization ISO
Inferred from Sequence Orthology
more info
 
involved_in regulation of protein phosphorylation ISO
Inferred from Sequence Orthology
more info
 
involved_in regulation of synapse organization ISO
Inferred from Sequence Orthology
more info
 
acts_upstream_of_or_within regulation of synaptic activity IDA
Inferred from Direct Assay
more info
PubMed 
involved_in skeletal muscle acetylcholine-gated channel clustering ISO
Inferred from Sequence Orthology
more info
 
involved_in synapse assembly ISO
Inferred from Sequence Orthology
more info
 
Component Evidence Code Pubs
located_in Golgi lumen TAS
Traceable Author Statement
more info
 
located_in axonal growth cone ISO
Inferred from Sequence Orthology
more info
 
located_in basement membrane IDA
Inferred from Direct Assay
more info
PubMed 
located_in basement membrane ISO
Inferred from Sequence Orthology
more info
 
located_in cell surface IDA
Inferred from Direct Assay
more info
PubMed 
located_in collagen-containing extracellular matrix HDA PubMed 
located_in collagen-containing extracellular matrix ISO
Inferred from Sequence Orthology
more info
 
located_in extracellular region TAS
Traceable Author Statement
more info
 
located_in extracellular space HDA PubMed 
is_active_in extracellular space IDA
Inferred from Direct Assay
more info
PubMed 
located_in extracellular space IDA
Inferred from Direct Assay
more info
PubMed 
located_in extracellular space TAS
Traceable Author Statement
more info
PubMed 
is_active_in glutamatergic synapse ISO
Inferred from Sequence Orthology
more info
 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 
located_in sarcolemma IDA
Inferred from Direct Assay
more info
PubMed 
is_active_in synapse EXP
Inferred from Experiment
more info
PubMed 
is_active_in synapse IDA
Inferred from Direct Assay
more info
PubMed 
located_in synapse IDA
Inferred from Direct Assay
more info
PubMed 
located_in synapse ISO
Inferred from Sequence Orthology
more info
 
located_in synaptic cleft IDA
Inferred from Direct Assay
more info
PubMed 

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001369026.1NP_001355955.1  agrin isoform 2

    Status: VALIDATED

    Source sequence(s)
    AL928667, CT998563
    Consensus CDS
    CCDS89874.1
    UniProtKB/Swiss-Prot
    A2ASP9, A2ASQ0, A2ASQ1, B2RWU1
    UniProtKB/TrEMBL
    Z4YK85
    Related
    ENSMUSP00000101200.3, ENSMUST00000105575.9
    Conserved Domains (7) summary
    smart00280
    Location:384429
    KAZAL; Kazal type serine protease inhibitors
    smart00200
    Location:10141138
    SEA; Domain found in sea urchin sperm protein, enterokinase, agrin
    cd00054
    Location:17071739
    EGF_CA; Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the ...
    cd00104
    Location:316356
    KAZAL_FS; Kazal type serine protease inhibitors and follistatin-like domains. Kazal inhibitors inhibit serine proteases, such as, trypsin, chyomotrypsin, avian ovomucoids, and elastases. The inhibitory domain has one reactive site peptide bond, which serves the ...
    pfam00050
    Location:244284
    Kazal_1; Kazal-type serine protease inhibitor domain
    pfam00053
    Location:688735
    Laminin_EGF; Laminin EGF domain
    pfam00054
    Location:12821413
    Laminin_G_1; Laminin G domain
  2. NM_001369027.1NP_001355956.1  agrin isoform 3 precursor

    Status: VALIDATED

    Source sequence(s)
    CT998563
    Conserved Domains (1) summary
    pfam03146
    Location:46148
    NtA; Agrin NtA domain
  3. NM_021604.3NP_067617.3  agrin isoform 1 precursor

    Status: VALIDATED

    Source sequence(s)
    AL928667, CT998563
    Consensus CDS
    CCDS19060.2
    UniProtKB/TrEMBL
    M0QWP1, Z4YK85
    Related
    ENSMUSP00000137931.2, ENSMUST00000180572.2
    Conserved Domains (8) summary
    smart00280
    Location:491536
    KAZAL; Kazal type serine protease inhibitors
    smart00200
    Location:11211245
    SEA; Domain found in sea urchin sperm protein, enterokinase, agrin
    cd00054
    Location:18101842
    EGF_CA; Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the ...
    cd00104
    Location:423463
    KAZAL_FS; Kazal type serine protease inhibitors and follistatin-like domains. Kazal inhibitors inhibit serine proteases, such as, trypsin, chyomotrypsin, avian ovomucoids, and elastases. The inhibitory domain has one reactive site peptide bond, which serves the ...
    pfam00050
    Location:351391
    Kazal_1; Kazal-type serine protease inhibitor domain
    pfam00053
    Location:795837
    Laminin_EGF; Laminin EGF domain
    pfam00054
    Location:13891520
    Laminin_G_1; Laminin G domain
    pfam03146
    Location:46148
    NtA; Agrin NtA domain

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000070.7 Reference GRCm39 C57BL/6J

    Range
    156249747..156281997 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_036163604.1XP_036019497.1  agrin isoform X5

    UniProtKB/TrEMBL
    Z4YK85
    Conserved Domains (9) summary
    smart00280
    Location:491536
    KAZAL; Kazal type serine protease inhibitors
    smart00200
    Location:11211245
    SEA; Domain found in sea urchin sperm protein, enterokinase, agrin
    cd00054
    Location:18101842
    EGF_CA; Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the ...
    cd00104
    Location:423463
    KAZAL_FS; Kazal type serine protease inhibitors and follistatin-like domains. Kazal inhibitors inhibit serine proteases, such as, trypsin, chyomotrypsin, avian ovomucoids, and elastases. The inhibitory domain has one reactive site peptide bond, which serves the ...
    pfam00008
    Location:13221352
    EGF; EGF-like domain
    pfam00053
    Location:795837
    Laminin_EGF; Laminin EGF domain
    pfam00054
    Location:13891520
    Laminin_G_1; Laminin G domain
    pfam03146
    Location:46148
    NtA; Agrin NtA domain
    cl00097
    Location:351391
    KAZAL_FS; Kazal type serine protease inhibitors and follistatin-like domains. Kazal inhibitors inhibit serine proteases, such as, trypsin, chyomotrypsin, avian ovomucoids, and elastases. The inhibitory domain has one reactive site peptide bond, which serves the ...
  2. XM_011250176.3XP_011248478.1  agrin isoform X2

    UniProtKB/TrEMBL
    Z4YK85
    Conserved Domains (10) summary
    smart00280
    Location:491536
    KAZAL; Kazal type serine protease inhibitors
    smart00200
    Location:11211245
    SEA; Domain found in sea urchin sperm protein, enterokinase, agrin
    cd00054
    Location:18101842
    EGF_CA; Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the ...
    cd00055
    Location:795835
    EGF_Lam; Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in ...
    cd00104
    Location:423463
    KAZAL_FS; Kazal type serine protease inhibitors and follistatin-like domains. Kazal inhibitors inhibit serine proteases, such as, trypsin, chyomotrypsin, avian ovomucoids, and elastases. The inhibitory domain has one reactive site peptide bond, which serves the ...
    pfam00008
    Location:13221352
    EGF; EGF-like domain
    pfam00050
    Location:351391
    Kazal_1; Kazal-type serine protease inhibitor domain
    pfam00054
    Location:13891520
    Laminin_G_1; Laminin G domain
    pfam00053
    Location:849885
    Laminin_EGF; Laminin EGF domain
    pfam03146
    Location:46148
    NtA; Agrin NtA domain
  3. XM_006538494.5XP_006538557.1  agrin isoform X6

    UniProtKB/TrEMBL
    Z4YK85
    Conserved Domains (9) summary
    smart00280
    Location:491536
    KAZAL; Kazal type serine protease inhibitors
    smart00200
    Location:11211245
    SEA; Domain found in sea urchin sperm protein, enterokinase, agrin
    cd00054
    Location:18141846
    EGF_CA; Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the ...
    cd00055
    Location:795835
    EGF_Lam; Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in ...
    cd00104
    Location:423463
    KAZAL_FS; Kazal type serine protease inhibitors and follistatin-like domains. Kazal inhibitors inhibit serine proteases, such as, trypsin, chyomotrypsin, avian ovomucoids, and elastases. The inhibitory domain has one reactive site peptide bond, which serves the ...
    pfam00050
    Location:351391
    Kazal_1; Kazal-type serine protease inhibitor domain
    pfam00054
    Location:13891520
    Laminin_G_1; Laminin G domain
    pfam00053
    Location:849885
    Laminin_EGF; Laminin EGF domain
    pfam03146
    Location:46148
    NtA; Agrin NtA domain
  4. XM_006538492.3XP_006538555.1  agrin isoform X3

    UniProtKB/TrEMBL
    Z4YK85
    Conserved Domains (10) summary
    smart00280
    Location:491536
    KAZAL; Kazal type serine protease inhibitors
    smart00200
    Location:11211245
    SEA; Domain found in sea urchin sperm protein, enterokinase, agrin
    cd00054
    Location:18141846
    EGF_CA; Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the ...
    cd00055
    Location:795835
    EGF_Lam; Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in ...
    cd00104
    Location:423463
    KAZAL_FS; Kazal type serine protease inhibitors and follistatin-like domains. Kazal inhibitors inhibit serine proteases, such as, trypsin, chyomotrypsin, avian ovomucoids, and elastases. The inhibitory domain has one reactive site peptide bond, which serves the ...
    pfam00008
    Location:13221352
    EGF; EGF-like domain
    pfam00050
    Location:351391
    Kazal_1; Kazal-type serine protease inhibitor domain
    pfam00054
    Location:13891520
    Laminin_G_1; Laminin G domain
    pfam00053
    Location:849885
    Laminin_EGF; Laminin EGF domain
    pfam03146
    Location:46148
    NtA; Agrin NtA domain
  5. XM_006538493.3XP_006538556.1  agrin isoform X4

    UniProtKB/TrEMBL
    Z4YK85
    Conserved Domains (10) summary
    smart00280
    Location:491536
    KAZAL; Kazal type serine protease inhibitors
    smart00200
    Location:11211245
    SEA; Domain found in sea urchin sperm protein, enterokinase, agrin
    cd00054
    Location:18141846
    EGF_CA; Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the ...
    cd00055
    Location:795835
    EGF_Lam; Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in ...
    cd00104
    Location:423463
    KAZAL_FS; Kazal type serine protease inhibitors and follistatin-like domains. Kazal inhibitors inhibit serine proteases, such as, trypsin, chyomotrypsin, avian ovomucoids, and elastases. The inhibitory domain has one reactive site peptide bond, which serves the ...
    pfam00008
    Location:13221352
    EGF; EGF-like domain
    pfam00050
    Location:351391
    Kazal_1; Kazal-type serine protease inhibitor domain
    pfam00054
    Location:13891520
    Laminin_G_1; Laminin G domain
    pfam00053
    Location:849885
    Laminin_EGF; Laminin EGF domain
    pfam03146
    Location:46148
    NtA; Agrin NtA domain
  6. XM_006538491.3XP_006538554.1  agrin isoform X1

    UniProtKB/TrEMBL
    Z4YK85
    Conserved Domains (10) summary
    smart00280
    Location:491536
    KAZAL; Kazal type serine protease inhibitors
    smart00200
    Location:11211245
    SEA; Domain found in sea urchin sperm protein, enterokinase, agrin
    cd00054
    Location:18141846
    EGF_CA; Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the ...
    cd00055
    Location:795835
    EGF_Lam; Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in ...
    cd00104
    Location:423463
    KAZAL_FS; Kazal type serine protease inhibitors and follistatin-like domains. Kazal inhibitors inhibit serine proteases, such as, trypsin, chyomotrypsin, avian ovomucoids, and elastases. The inhibitory domain has one reactive site peptide bond, which serves the ...
    pfam00008
    Location:13221352
    EGF; EGF-like domain
    pfam00050
    Location:351391
    Kazal_1; Kazal-type serine protease inhibitor domain
    pfam00054
    Location:13891520
    Laminin_G_1; Laminin G domain
    pfam00053
    Location:849885
    Laminin_EGF; Laminin EGF domain
    pfam03146
    Location:46148
    NtA; Agrin NtA domain
  7. XM_006538496.4XP_006538559.1  agrin isoform X8

    UniProtKB/TrEMBL
    Z4YK85
    Conserved Domains (8) summary
    smart00280
    Location:323368
    KAZAL; Kazal type serine protease inhibitors
    smart00200
    Location:9531077
    SEA; Domain found in sea urchin sperm protein, enterokinase, agrin
    cd00054
    Location:16461678
    EGF_CA; Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the ...
    cd00055
    Location:627667
    EGF_Lam; Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in ...
    cd00104
    Location:255295
    KAZAL_FS; Kazal type serine protease inhibitors and follistatin-like domains. Kazal inhibitors inhibit serine proteases, such as, trypsin, chyomotrypsin, avian ovomucoids, and elastases. The inhibitory domain has one reactive site peptide bond, which serves the ...
    pfam00050
    Location:183223
    Kazal_1; Kazal-type serine protease inhibitor domain
    pfam00054
    Location:12211352
    Laminin_G_1; Laminin G domain
    pfam00053
    Location:681717
    Laminin_EGF; Laminin EGF domain
  8. XM_006538495.4XP_006538558.1  agrin isoform X7

    UniProtKB/TrEMBL
    Z4YK85
    Conserved Domains (8) summary
    smart00280
    Location:384429
    KAZAL; Kazal type serine protease inhibitors
    smart00200
    Location:10141138
    SEA; Domain found in sea urchin sperm protein, enterokinase, agrin
    cd00054
    Location:17071739
    EGF_CA; Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the ...
    cd00055
    Location:688728
    EGF_Lam; Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in ...
    cd00104
    Location:316356
    KAZAL_FS; Kazal type serine protease inhibitors and follistatin-like domains. Kazal inhibitors inhibit serine proteases, such as, trypsin, chyomotrypsin, avian ovomucoids, and elastases. The inhibitory domain has one reactive site peptide bond, which serves the ...
    pfam00050
    Location:244284
    Kazal_1; Kazal-type serine protease inhibitor domain
    pfam00054
    Location:12821413
    Laminin_G_1; Laminin G domain
    pfam00053
    Location:742778
    Laminin_EGF; Laminin EGF domain
  9. XM_017319921.1XP_017175410.1  agrin isoform X9

    UniProtKB/TrEMBL
    Z4YK85
    Conserved Domains (8) summary
    smart00280
    Location:257302
    KAZAL; Kazal type serine protease inhibitors
    smart00200
    Location:8871011
    SEA; Domain found in sea urchin sperm protein, enterokinase, agrin
    cd00054
    Location:15801612
    EGF_CA; Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the ...
    cd00055
    Location:561601
    EGF_Lam; Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in ...
    cd00104
    Location:189229
    KAZAL_FS; Kazal type serine protease inhibitors and follistatin-like domains. Kazal inhibitors inhibit serine proteases, such as, trypsin, chyomotrypsin, avian ovomucoids, and elastases. The inhibitory domain has one reactive site peptide bond, which serves the ...
    pfam00050
    Location:117157
    Kazal_1; Kazal-type serine protease inhibitor domain
    pfam00054
    Location:11551286
    Laminin_G_1; Laminin G domain
    pfam00053
    Location:615651
    Laminin_EGF; Laminin EGF domain
  10. XM_036163605.1XP_036019498.1  agrin isoform X11

    UniProtKB/TrEMBL
    Q6PCM6
    Conserved Domains (6) summary
    smart00280
    Location:162209
    KAZAL; Kazal type serine protease inhibitors
    smart00200
    Location:359483
    SEA; Domain found in sea urchin sperm protein, enterokinase, agrin
    cd00054
    Location:10521084
    EGF_CA; Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the ...
    pfam00008
    Location:560590
    EGF; EGF-like domain
    pfam00053
    Location:3384
    Laminin_EGF; Laminin EGF domain
    pfam00054
    Location:627758
    Laminin_G_1; Laminin G domain
  11. XM_030253098.1XP_030108958.1  agrin isoform X11

    UniProtKB/TrEMBL
    Q6PCM6
    Conserved Domains (6) summary
    smart00280
    Location:162209
    KAZAL; Kazal type serine protease inhibitors
    smart00200
    Location:359483
    SEA; Domain found in sea urchin sperm protein, enterokinase, agrin
    cd00054
    Location:10521084
    EGF_CA; Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the ...
    pfam00008
    Location:560590
    EGF; EGF-like domain
    pfam00053
    Location:3384
    Laminin_EGF; Laminin EGF domain
    pfam00054
    Location:627758
    Laminin_G_1; Laminin G domain
  12. XM_011250178.1XP_011248480.1  agrin isoform X10

    Conserved Domains (7) summary
    smart00280
    Location:3782
    KAZAL; Kazal type serine protease inhibitors
    smart00200
    Location:602726
    SEA; Domain found in sea urchin sperm protein, enterokinase, agrin
    cd00054
    Location:12951327
    EGF_CA; Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the ...
    cd00055
    Location:276316
    EGF_Lam; Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in ...
    pfam00008
    Location:803833
    EGF; EGF-like domain
    pfam00054
    Location:8701001
    Laminin_G_1; Laminin G domain
    pfam00053
    Location:330366
    Laminin_EGF; Laminin EGF domain

RNA

  1. XR_881417.4 RNA Sequence

  2. XR_390724.3 RNA Sequence