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pln1 phospholamban 1 [ Gadus morhua (Atlantic cod) ]

Gene ID: 115534023, updated on 17-Mar-2024

Summary

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Gene symbol
pln1
Gene description
phospholamban 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Gadus morhua
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Zeiogadaria; Gadariae; Gadiformes; Gadoidei; Gadidae; Gadus
Also known as
pln
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: 21
Exon count:
3
Annotation release Status Assembly Chr Location
100 current gadMor3.0 (GCF_902167405.1) 21 NC_044068.1 (14870245..14872245, complement)

Chromosome 21 - NC_044068.1Genomic Context describing neighboring genes Neighboring gene family with sequence similarity 184 member Ab Neighboring gene minichromosome maintenance 9 homologous recombination repair factor Neighboring gene centrosomal protein 85, like Neighboring gene uncharacterized LOC115534716 Neighboring gene NUS1 dehydrodolichyl diphosphate synthase subunit

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_044068.1 Chromosome 21 Reference gadMor3.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The genome sequence of Atlantic cod reveals a unique immune system. Star B, et al. Nature, 2011 Aug 10. PMID 21832995, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATPase inhibitor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in negative regulation of ATPase-coupled calcium transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of calcium ion import into sarcoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of heart rate IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in sarcoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cardiac phospholamban
Names
phospholamban

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gadus morhua Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference gadMor3.0 Primary Assembly

Genomic

  1. NC_044068.1 Reference gadMor3.0 Primary Assembly

    Range
    14870245..14872245 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_030344597.1 → XP_030200457.1  cardiac phospholamban

    UniProtKB/TrEMBL
    A0A8C5BQ03
    Conserved Domains (1) summary
    cd20250
    Location:1 → 53
    Phospholamban; Phospholamban bioactive peptide and similar proteins

  2. XM_030344596.1 → XP_030200456.1  cardiac phospholamban

    UniProtKB/TrEMBL
    A0A8C5BQ03
    Conserved Domains (1) summary
    cd20250
    Location:1 → 53
    Phospholamban; Phospholamban bioactive peptide and similar proteins
Nucleotide Protein
Heading Accession and Version

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