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Zfp1010 zinc finger protein 1010 [ Mus musculus (house mouse) ]

Gene ID: 115489547, updated on 8-Feb-2024

Summary

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Official Symbol
Zfp1010provided by MGI
Official Full Name
zinc finger protein 1010provided by MGI
Primary source
MGI:MGI:3649811
See related
Ensembl:ENSMUSG00000078869 AllianceGenome:MGI:3649811
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Gm14409
Summary
Predicted to enable DNA-binding transcription factor activity, RNA polymerase II-specific and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Predicted to be involved in regulation of transcription by RNA polymerase II. [provided by Alliance of Genome Resources, Apr 2022]
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Genomic context

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Location:
2 99.28 cM; 2 H4
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 2 NC_000068.8 (176955464..176958870, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 2 NC_000068.7 (177266658..177272506, complement)

Chromosome 2 - NC_000068.8Genomic Context describing neighboring genes Neighboring gene predicted gene 14410 Neighboring gene STARR-seq mESC enhancer starr_06667 Neighboring gene predicted gene 14400 Neighboring gene STARR-seq mESC enhancer starr_06668 Neighboring gene STARR-positive B cell enhancer mm9_chr2:177099379-177099680 Neighboring gene predicted gene, 52574 Neighboring gene predicted gene, 41987 Neighboring gene STARR-seq mESC enhancer starr_06672 Neighboring gene STARR-seq mESC enhancer starr_06675 Neighboring gene STARR-seq mESC enhancer starr_06676 Neighboring gene STARR-seq mESC enhancer starr_06677 Neighboring gene novel KRAB box and zinc finger, C2H2 type domain containing protein

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. Zambrowicz BP, et al. Proc Natl Acad Sci U S A, 2003 Nov 25. PMID 14610273, Free PMC Article
  2. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IBA
Inferred from Biological aspect of Ancestor
more info
  
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IBA
Inferred from Biological aspect of Ancestor
more info
  
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

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Preferred Names
uncharacterized protein LOC115489547

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001416218.1 → NP_001403147.1  uncharacterized protein LOC115489547

    Status: VALIDATED

    Source sequence(s)
    AL845468
    Related
    ENSMUSP00000104591.3, ENSMUST00000108963.3

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000068.8 Reference GRCm39 C57BL/6J

    Range
    176955464..176958870 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NM_001388479.1: Suppressed sequence

    Description
    NM_001388479.1: This RefSeq was removed because currently there is insufficient support for the transcript and the protein.
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.