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n-R5s28 nuclear encoded rRNA 5S 28 [ Mus musculus (house mouse) ]

Gene ID: 115488828, updated on 8-Feb-2024

Summary

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Official Symbol
n-R5s28provided by MGI
Official Full Name
nuclear encoded rRNA 5S 28provided by MGI
Primary source
MGI:MGI:4421873
See related
Ensembl:ENSMUSG00000064748 AllianceGenome:MGI:4421873
Gene type
rRNA
RefSeq status
MODEL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
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Genomic context

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Location:
17 C; 17 23.99 cM
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 17 NC_000083.7 (48159759..48159877)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 17 NC_000083.6 (47848834..47848952)

Chromosome 17 - NC_000083.7Genomic Context describing neighboring genes Neighboring gene MyoD family inhibitor Neighboring gene predicted gene, 25201 Neighboring gene STARR-seq mESC enhancer starr_42731 Neighboring gene forkhead box P4 Neighboring gene STARR-seq mESC enhancer starr_42732 Neighboring gene STARR-seq mESC enhancer starr_42734 Neighboring gene CapStarr-seq enhancer MGSCv37_chr17:48037747-48037856 Neighboring gene STARR-positive B cell enhancer ABC_E8679 Neighboring gene macrophage migration inhibitory factor, pseudogene 8

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Ppan is essential for preimplantation development in mice†. Tian Q, et al. Biol Reprod, 2022 Sep 12. PMID 35554497
  2. Rfam: updates to the RNA families database. Gardner PP, et al. Nucleic Acids Res, 2009 Jan. PMID 18953034, Free PMC Article

GeneRIFs: Gene References Into Functions

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000083.7 Reference GRCm39 C57BL/6J

    Range
    48159759..48159877
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_004939747.1 RNA Sequence

    Related
    ENSMUST00000082814.3
Nucleotide Protein Strain
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