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H3P10 H3 histone pseudogene 10 [ Homo sapiens (human) ]

Gene ID: 115482713, updated on 10-Oct-2023

Summary

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Official Symbol
H3P10provided by HGNC
Official Full Name
H3 histone pseudogene 10provided by HGNC
Primary source
HGNC:HGNC:43802
See related
AllianceGenome:HGNC:43802
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
p16
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Genomic context

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See H3P10 in Genome Data Viewer
Location:
3p24.2
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 3 NC_000003.12 (25440964..25441616, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 3 NC_060927.1 (25443797..25444449, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 3 NC_000003.11 (25482455..25483107, complement)

Chromosome 3 - NC_000003.12Genomic Context describing neighboring genes Neighboring gene retinoic acid receptor beta Neighboring gene RNA, 5S ribosomal pseudogene 126 Neighboring gene Sharpr-MPRA regulatory region 14684 Neighboring gene OCT4-NANOG-H3K4me1 hESC enhancer GRCh37_chr3:25461538-25462319 Neighboring gene H3K27ac hESC enhancer GRCh37_chr3:25468815-25469652 Neighboring gene RARB antisense RNA 1 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr3:25491906-25492406 Neighboring gene NANOG-H3K27ac hESC enhancer GRCh37_chr3:25495987-25496611 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr3:25496710-25497250 Neighboring gene uncharacterized LOC124909356 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr3:25609805-25610306 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr3:25614420-25614948 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr3:25614949-25615476 Neighboring gene NUP98-TOP2B recombination region Neighboring gene ATAC-STARR-seq lymphoblastoid active region 19608 Neighboring gene ReSE screen-validated silencer GRCh37_chr3:25705465-25705653 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 14146 Neighboring gene H3K27ac hESC enhancer GRCh37_chr3:25706135-25706698 Neighboring gene DNA topoisomerase II beta Neighboring gene microRNA 4442

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The human histone H3 complement anno 2011. Ederveen TH, et al. Biochim Biophys Acta, 2011 Oct. PMID 21782046

GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

General gene information

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NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_066058.2 

    Range
    87..739
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000003.12 Reference GRCh38.p14 Primary Assembly

    Range
    25440964..25441616 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060927.1 Alternate T2T-CHM13v2.0

    Range
    25443797..25444449 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

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