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Add2 adducin 2 [ Mus musculus (house mouse) ]

Gene ID: 11519, updated on 21-Apr-2024

Summary

Official Symbol
Add2provided by MGI
Official Full Name
adducin 2provided by MGI
Primary source
MGI:MGI:87919
See related
Ensembl:ENSMUSG00000030000 AllianceGenome:MGI:87919
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
add97; 2900072M03Rik
Summary
This gene encodes the beta subunit of the adducin family. Adducins, encoded by alpha, beta and gamma genes, are heteromeric proteins that crosslink actin filaments with spectrin at the cytoskeletal membrane. This protein, primarily found in the brain and hematopoietic cells, is regulated by phosphorylation and calmodulin interactions as it promotes spectrin assembly onto actin filaments, bundles actin and caps barbed ends of actin filaments. In mouse, deficiency of this gene can lead to mild hemolytic anemia and impaired synaptic plasticity. Mutations of this gene in mouse serve as a pathophysiological model for hereditary spherocytosis and hereditary elliptocytosis. Alternative splicing results in multiple transcript variants that encode different protein isoforms. [provided by RefSeq, Dec 2012]
Expression
Biased expression in CNS E18 (RPKM 33.1), whole brain E14.5 (RPKM 28.0) and 10 other tissues See more
Orthologs
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Genomic context

Location:
6 C3- D1; 6 37.55 cM
Exon count:
17
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 6 NC_000072.7 (86005663..86101391)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 6 NC_000072.6 (86028681..86124409)

Chromosome 6 - NC_000072.7Genomic Context describing neighboring genes Neighboring gene RIKEN cDNA 4930553P18 gene Neighboring gene predicted gene, 33319 Neighboring gene folliculogenesis specific basic helix-loop-helix Neighboring gene predicted gene, 19596 Neighboring gene transforming growth factor alpha

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)

Pathways from PubChem

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables actin binding ISO
Inferred from Sequence Orthology
more info
 
enables actin filament binding IBA
Inferred from Biological aspect of Ancestor
more info
 
enables actin filament binding ISO
Inferred from Sequence Orthology
more info
 
enables calmodulin binding IEA
Inferred from Electronic Annotation
more info
 
enables protein dimerization activity ISO
Inferred from Sequence Orthology
more info
 
enables protein heterodimerization activity ISO
Inferred from Sequence Orthology
more info
 
enables protein homodimerization activity ISO
Inferred from Sequence Orthology
more info
 
enables protein kinase binding ISO
Inferred from Sequence Orthology
more info
 
enables spectrin binding ISO
Inferred from Sequence Orthology
more info
 
enables structural constituent of cytoskeleton IDA
Inferred from Direct Assay
more info
PubMed 
Process Evidence Code Pubs
involved_in actin filament bundle assembly ISO
Inferred from Sequence Orthology
more info
 
involved_in barbed-end actin filament capping IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in barbed-end actin filament capping ISO
Inferred from Sequence Orthology
more info
 
acts_upstream_of_or_within hemopoiesis IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in leukocyte migration ISO
Inferred from Sequence Orthology
more info
 
involved_in leukocyte tethering or rolling ISO
Inferred from Sequence Orthology
more info
 
involved_in monoatomic ion transport ISO
Inferred from Sequence Orthology
more info
 
involved_in positive regulation of protein binding ISO
Inferred from Sequence Orthology
more info
 
involved_in protein-containing complex assembly ISO
Inferred from Sequence Orthology
more info
 
involved_in synapse assembly IDA
Inferred from Direct Assay
more info
PubMed 
involved_in synapse assembly IEP
Inferred from Expression Pattern
more info
PubMed 
involved_in synapse assembly IMP
Inferred from Mutant Phenotype
more info
PubMed 
Component Evidence Code Pubs
part_of F-actin capping protein complex ISO
Inferred from Sequence Orthology
more info
 
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 
located_in cytoplasmic vesicle ISO
Inferred from Sequence Orthology
more info
 
is_active_in cytoskeleton IBA
Inferred from Biological aspect of Ancestor
more info
 
is_active_in glutamatergic synapse ISO
Inferred from Sequence Orthology
more info
 
located_in membrane IDA
Inferred from Direct Assay
more info
PubMed 
is_active_in plasma membrane IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in plasma membrane raft ISO
Inferred from Sequence Orthology
more info
 
is_active_in postsynapse ISO
Inferred from Sequence Orthology
more info
 
is_active_in postsynaptic density IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in postsynaptic density IDA
Inferred from Direct Assay
more info
PubMed 

General protein information

Preferred Names
beta-adducin
Names
adducin 2 (beta)
erythrocyte adducin subunit beta
snoRNA MBII-396

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001271857.1NP_001258786.1  beta-adducin isoform 1

    See identical proteins and their annotated locations for NP_001258786.1

    Status: REVIEWED

    Description
    Transcript Variant: This variant (1) represents the longest transcript and encodes the longer isoform (1). Variants 1, 2, 3 and 4 encode the same isoform (1, also known as beta-1).
    Source sequence(s)
    AI835294, AK014496, AK147544, BE951615, BU058008, BU708888, BY146240, BY712734, CB519116, CB524359, CB722600
    Consensus CDS
    CCDS20308.1
    UniProtKB/Swiss-Prot
    Q3U0E1, Q80VH9, Q8C1C4, Q9CXE3, Q9JLE4, Q9JLE5, Q9QYB7, Q9QYB8
    UniProtKB/TrEMBL
    Q8C0Y2
    Conserved Domains (3) summary
    PRK08724
    Location:410598
    fliD; flagellar filament capping protein FliD
    TIGR00601
    Location:562664
    rad23; UV excision repair protein Rad23
    cl00214
    Location:130379
    Aldolase_II; Class II Aldolase and Adducin head (N-terminal) domain. Aldolases are ubiquitous enzymes catalyzing central steps of carbohydrate metabolism. Based on enzymatic mechanisms, this superfamily has been divided into two distinct classes (Class I and II). ...
  2. NM_001271858.1NP_001258787.1  beta-adducin isoform 1

    See identical proteins and their annotated locations for NP_001258787.1

    Status: REVIEWED

    Description
    Transcript Variant: This variant (2) differs in the 5' UTR compared to variant 1. Variants 1, 2, 3 and 4 encode the same isoform (1, also known as beta-1).
    Source sequence(s)
    AI835294, AK014496, AK029488, AK147544, BE951615, BU058008, BU708888, BY146240, BY712734, CB519116, CB524359, CB722600
    Consensus CDS
    CCDS20308.1
    UniProtKB/Swiss-Prot
    Q3U0E1, Q80VH9, Q8C1C4, Q9CXE3, Q9JLE4, Q9JLE5, Q9QYB7, Q9QYB8
    UniProtKB/TrEMBL
    Q8C0Y2
    Related
    ENSMUSP00000145160.2, ENSMUST00000204059.3
    Conserved Domains (3) summary
    PRK08724
    Location:410598
    fliD; flagellar filament capping protein FliD
    TIGR00601
    Location:562664
    rad23; UV excision repair protein Rad23
    cl00214
    Location:130379
    Aldolase_II; Class II Aldolase and Adducin head (N-terminal) domain. Aldolases are ubiquitous enzymes catalyzing central steps of carbohydrate metabolism. Based on enzymatic mechanisms, this superfamily has been divided into two distinct classes (Class I and II). ...
  3. NM_001271859.1NP_001258788.1  beta-adducin isoform 1

    See identical proteins and their annotated locations for NP_001258788.1

    Status: REVIEWED

    Description
    Transcript Variant: This variant (4) differs in the 5' UTR compared to variant 1. Variants 1, 2, 3 and 4 encode the same isoform (1, also known as beta-1).
    Source sequence(s)
    AC158645
    Consensus CDS
    CCDS20308.1
    UniProtKB/Swiss-Prot
    Q3U0E1, Q80VH9, Q8C1C4, Q9CXE3, Q9JLE4, Q9JLE5, Q9QYB7, Q9QYB8
    UniProtKB/TrEMBL
    Q8C0Y2
    Related
    ENSMUSP00000145296.2, ENSMUST00000203724.3
    Conserved Domains (3) summary
    PRK08724
    Location:410598
    fliD; flagellar filament capping protein FliD
    TIGR00601
    Location:562664
    rad23; UV excision repair protein Rad23
    cl00214
    Location:130379
    Aldolase_II; Class II Aldolase and Adducin head (N-terminal) domain. Aldolases are ubiquitous enzymes catalyzing central steps of carbohydrate metabolism. Based on enzymatic mechanisms, this superfamily has been divided into two distinct classes (Class I and II). ...
  4. NM_001271860.1NP_001258789.1  beta-adducin isoform 2

    See identical proteins and their annotated locations for NP_001258789.1

    Status: REVIEWED

    Description
    Transcript Variant: This variant (5) lacks several 3' exons and contains an alternate 3' exon, and thus differs in the 3' coding region and 3' UTR, compared to variant 1. The encoded isoform (2) has a distinct C-terminus and is shorter than isoform 1. Both variants 5 and 6 encode the same isoform (2, also known as beta-2).
    Source sequence(s)
    BC053032, BY146240
    Consensus CDS
    CCDS85085.1
    UniProtKB/Swiss-Prot
    Q9QYB8
    Related
    ENSMUSP00000144849.2, ENSMUST00000203366.3
    Conserved Domains (1) summary
    cl00214
    Location:130379
    Aldolase_II; Class II Aldolase and Adducin head (N-terminal) domain. Aldolases are ubiquitous enzymes catalyzing central steps of carbohydrate metabolism. Based on enzymatic mechanisms, this superfamily has been divided into two distinct classes (Class I and II). ...
  5. NM_001271861.1NP_001258790.1  beta-adducin isoform 2

    See identical proteins and their annotated locations for NP_001258790.1

    Status: REVIEWED

    Description
    Transcript Variant: This variant (6) differs in the 5' UTR, lacks several 3' exons and contains an alternate 3' exon, and thus differs in the 3' coding region and 3' UTR, compared to variant 1. The encoded isoform (2) has a distinct C-terminus and is shorter than isoform 1. Both variants 5 and 6 encode the same isoform (2, also known as beta-2).
    Source sequence(s)
    AC158645, AK028425, BC053032
    Consensus CDS
    CCDS85085.1
    UniProtKB/Swiss-Prot
    Q9QYB8
    Related
    ENSMUSP00000145034.2, ENSMUST00000205034.3
    Conserved Domains (1) summary
    cl00214
    Location:130379
    Aldolase_II; Class II Aldolase and Adducin head (N-terminal) domain. Aldolases are ubiquitous enzymes catalyzing central steps of carbohydrate metabolism. Based on enzymatic mechanisms, this superfamily has been divided into two distinct classes (Class I and II). ...
  6. NM_013458.5NP_038486.2  beta-adducin isoform 1

    See identical proteins and their annotated locations for NP_038486.2

    Status: REVIEWED

    Description
    Transcript Variant: This variant (3) differs in the 5' UTR compared to variant 1. Variants 1, 2, 3 and 4 encode the same isoform (1, also known as beta-1).
    Source sequence(s)
    AC158645, AI835294, AK014496, AK147544, BE951615, BU058008, BU708888, BY712734, CB519116, CB524359, CB722600
    Consensus CDS
    CCDS20308.1
    UniProtKB/Swiss-Prot
    Q3U0E1, Q80VH9, Q8C1C4, Q9CXE3, Q9JLE4, Q9JLE5, Q9QYB7, Q9QYB8
    UniProtKB/TrEMBL
    Q8C0Y2
    Related
    ENSMUSP00000032069.6, ENSMUST00000032069.8
    Conserved Domains (3) summary
    PRK08724
    Location:410598
    fliD; flagellar filament capping protein FliD
    TIGR00601
    Location:562664
    rad23; UV excision repair protein Rad23
    cl00214
    Location:130379
    Aldolase_II; Class II Aldolase and Adducin head (N-terminal) domain. Aldolases are ubiquitous enzymes catalyzing central steps of carbohydrate metabolism. Based on enzymatic mechanisms, this superfamily has been divided into two distinct classes (Class I and II). ...

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000072.7 Reference GRCm39 C57BL/6J

    Range
    86005663..86101391
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)