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Adam3 ADAM metallopeptidase domain 3 [ Mus musculus (house mouse) ]

Gene ID: 11497, updated on 18-Apr-2024

Summary

Official Symbol
Adam3provided by MGI
Official Full Name
ADAM metallopeptidase domain 3provided by MGI
Primary source
MGI:MGI:102518
See related
Ensembl:ENSMUSG00000031553 AllianceGenome:MGI:102518
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
tMDC; Cyrn1; Taz83
Summary
Predicted to enable metalloendopeptidase activity. Involved in fertilization and flagellated sperm motility. Acts upstream of or within binding activity of sperm to zona pellucida; positive regulation of gene expression; and regulation of mRNA processing. Located in several cellular components, including cell surface; membrane raft; and sperm head. Part of protein-containing complex. Human ortholog(s) of this gene implicated in brain glioma and conjunctival squamous cell carcinoma. Orthologous to human ADAM3A (ADAM metallopeptidase domain 3A (pseudogene)). [provided by Alliance of Genome Resources, Apr 2022]
Expression
Restricted expression toward testis adult (RPKM 218.4) See more
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Genomic context

Location:
8 A2; 8 13.09 cM
Exon count:
23
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 8 NC_000074.7 (25167248..25216393, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 8 NC_000074.6 (24677232..24726377, complement)

Chromosome 8 - NC_000074.7Genomic Context describing neighboring genes Neighboring gene predicted gene, 51565 Neighboring gene indoleamine 2,3-dioxygenase 1 Neighboring gene a disintegrin and metallopeptidase domain 18 Neighboring gene predicted gene, 51566 Neighboring gene predicted gene, 26208 Neighboring gene STARR-seq mESC enhancer starr_20948 Neighboring gene a disintegrin and metallopeptidase domain 5 Neighboring gene a disintegrin and metallopeptidase domain 32 Neighboring gene STARR-seq mESC enhancer starr_20951

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Targeted (4)  1 citation
  • Endonuclease-mediated (2) 

General gene information

Clone Names

  • MGC150317

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables metalloendopeptidase activity IBA
Inferred from Biological aspect of Ancestor
more info
 
enables metallopeptidase activity IEA
Inferred from Electronic Annotation
more info
 
enables protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
Process Evidence Code Pubs
involved_in binding of sperm to zona pellucida IBA
Inferred from Biological aspect of Ancestor
more info
 
acts_upstream_of_or_within binding of sperm to zona pellucida IDA
Inferred from Direct Assay
more info
PubMed 
acts_upstream_of_or_within binding of sperm to zona pellucida IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in cell adhesion IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in fertilization IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in flagellated sperm motility IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in male gonad development IBA
Inferred from Biological aspect of Ancestor
more info
 
acts_upstream_of_or_within positive regulation of gene expression IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in proteolysis IBA
Inferred from Biological aspect of Ancestor
more info
 
acts_upstream_of_or_within regulation of mRNA processing IMP
Inferred from Mutant Phenotype
more info
PubMed 
acts_upstream_of_or_within single fertilization IGI
Inferred from Genetic Interaction
more info
PubMed 
Component Evidence Code Pubs
located_in cell surface IDA
Inferred from Direct Assay
more info
PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 
located_in membrane raft IDA
Inferred from Direct Assay
more info
PubMed 
is_active_in plasma membrane IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in plasma membrane IDA
Inferred from Direct Assay
more info
PubMed 
part_of protein-containing complex IDA
Inferred from Direct Assay
more info
PubMed 
located_in sperm head IDA
Inferred from Direct Assay
more info
PubMed 

General protein information

Preferred Names
A disintegrin and metallopeptidase domain 3
Names
a disintegrin and metallopeptidase domain 3 (cyritestin)

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001324489.1NP_001311418.1  A disintegrin and metallopeptidase domain 3 isoform 2

    Status: VALIDATED

    Source sequence(s)
    AC138355, BC049609, CJ047279, X64227
    UniProtKB/TrEMBL
    Q62287, Q810R6
    Conserved Domains (4) summary
    smart00608
    Location:289420
    ACR; ADAM Cysteine-Rich Domain
    pfam00200
    Location:210285
    Disintegrin
    pfam01421
    Location:1188
    Reprolysin; Reprolysin (M12B) family zinc metalloprotease
    pfam01683
    Location:406455
    EB; EB module
  2. NM_009619.5NP_033749.2  A disintegrin and metallopeptidase domain 3 isoform 1 precursor

    See identical proteins and their annotated locations for NP_033749.2

    Status: VALIDATED

    Source sequence(s)
    AC138355, BC049609, CJ047279, X64227
    Consensus CDS
    CCDS22196.1
    UniProtKB/Swiss-Prot
    F8VQ03
    UniProtKB/TrEMBL
    Q62287
    Related
    ENSMUSP00000033958.8, ENSMUST00000033958.15
    Conserved Domains (4) summary
    smart00050
    Location:404480
    DISIN; Homologues of snake disintegrins
    smart00608
    Location:483614
    ACR; ADAM Cysteine-Rich Domain
    pfam01562
    Location:27144
    Pep_M12B_propep; Reprolysin family propeptide
    cl26139
    Location:187382
    Reprolysin; Reprolysin (M12B) family zinc metalloprotease

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000074.7 Reference GRCm39 C57BL/6J

    Range
    25167248..25216393 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011242113.3XP_011240415.1  A disintegrin and metallopeptidase domain 3 isoform X1

    See identical proteins and their annotated locations for XP_011240415.1

    Conserved Domains (4) summary
    smart00608
    Location:289420
    ACR; ADAM Cysteine-Rich Domain
    pfam00200
    Location:210285
    Disintegrin
    pfam01421
    Location:1188
    Reprolysin; Reprolysin (M12B) family zinc metalloprotease
    pfam01683
    Location:406455
    EB; EB module
  2. XM_017312524.2XP_017168013.1  A disintegrin and metallopeptidase domain 3 isoform X1

    Conserved Domains (4) summary
    smart00608
    Location:289420
    ACR; ADAM Cysteine-Rich Domain
    pfam00200
    Location:210285
    Disintegrin
    pfam01421
    Location:1188
    Reprolysin; Reprolysin (M12B) family zinc metalloprotease
    pfam01683
    Location:406455
    EB; EB module
  3. XM_011242114.3XP_011240416.1  A disintegrin and metallopeptidase domain 3 isoform X2

    Conserved Domains (3) summary
    pfam00200
    Location:404444
    Disintegrin
    pfam01421
    Location:187382
    Reprolysin; Reprolysin (M12B) family zinc metalloprotease
    pfam01562
    Location:27144
    Pep_M12B_propep; Reprolysin family propeptide