U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

UMLILO upstream master lncRNA of the inflammatory chemokine locus [ Homo sapiens (human) ]

Gene ID: 114515515, updated on 26-Oct-2023

Summary

Go to the top of the page Help
Official Symbol
UMLILOprovided by HGNC
Official Full Name
upstream master lncRNA of the inflammatory chemokine locusprovided by HGNC
Primary source
HGNC:HGNC:51824
See related
Ensembl:ENSG00000228277 AllianceGenome:HGNC:51824
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See UMLILO in Genome Data Viewer
Location:
4q13.3
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 4 NC_000004.12 (73710347..73714527)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 4 NC_060928.1 (77054112..77058292)

Chromosome 4 - NC_000004.12Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC124900927 Neighboring gene Ras association domain family member 6 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 21613 Neighboring gene NANOG-H3K4me1 hESC enhancer GRCh37_chr4:74485627-74486176 Neighboring gene NANOG-H3K4me1 hESC enhancer GRCh37_chr4:74486177-74486725 Neighboring gene ReSE screen-validated silencer GRCh37_chr4:74527344-74527549 Neighboring gene ReSE screen-validated silencer GRCh37_chr4:74563013-74563209 Neighboring gene Sharpr-MPRA regulatory region 6280 Neighboring gene inflammatory MKL1 (MRTFA) interacting lncRNA Neighboring gene Sharpr-MPRA regulatory region 5404 Neighboring gene C-X-C motif chemokine ligand 8 Neighboring gene ReSE screen-validated silencer GRCh37_chr4:74664101-74664301 Neighboring gene Sharpr-MPRA regulatory region 12152 Neighboring gene Sharpr-MPRA regulatory region 152 Neighboring gene C-X-C motif chemokine ligand 6

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Immune genes are primed for robust transcription by proximal long noncoding RNAs located in nuclear compartments. Fanucchi S, et al. Nat Genet, 2019 Jan. PMID 30531872
  2. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. Kimura K, et al. Genome Res, 2006 Jan. PMID 16344560, Free PMC Article

GeneRIFs: Gene References Into Functions

Phenotypes

Go to the top of the page Help

Review eQTL and phenotype association data in this region using PheGenI

Variation

Go to the top of the page Help

See variants in ClinVar

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_186371.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC112518
    Related
    ENST00000436089.1

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000004.12 Reference GRCh38.p14 Primary Assembly

    Range
    73710347..73714527
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060928.1 Alternate T2T-CHM13v2.0

    Range
    77054112..77058292
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases