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NGF-AS1 NGF antisense RNA 1 [ Homo sapiens (human) ]

Gene ID: 112840934, updated on 10-Oct-2023

Summary

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Official Symbol
NGF-AS1provided by HGNC
Official Full Name
NGF antisense RNA 1provided by HGNC
Primary source
HGNC:HGNC:53922
See related
Ensembl:ENSG00000228035 AllianceGenome:HGNC:53922
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

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Location:
1p13.2
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 1 NC_000001.11 (115283034..115368072)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 1 NC_060925.1 (115294199..115379238)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 1 NC_000001.10 (115825655..115910693)

Chromosome 1 - NC_000001.11Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC124904359 Neighboring gene tetraspanin 2 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 1554 Neighboring gene long intergenic non-protein coding RNA 1765 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr1:115690783-115691409 Neighboring gene BRD4-independent group 4 enhancer GRCh37_chr1:115721881-115723080 Neighboring gene CDK7 strongly-dependent group 2 enhancer GRCh37_chr1:115800386-115801585 Neighboring gene BRD4-independent group 4 enhancer GRCh37_chr1:115842590-115843789 Neighboring gene nerve growth factor Neighboring gene uncharacterized LOC112268234 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr1:115974228-115974728 Neighboring gene uncharacterized LOC124904375 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr1:116088427-116089314 Neighboring gene elongin C pseudogene 20

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See variants in ClinVar

See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

General gene information

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Other Names

  • RP4-663N10.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_157569.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AL049825, AL512638
    Related
    ENST00000425449.1

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000001.11 Reference GRCh38.p14 Primary Assembly

    Range
    115283034..115368072
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060925.1 Alternate T2T-CHM13v2.0

    Range
    115294199..115379238
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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