U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC112268039 uncharacterized LOC112268039 [ Homo sapiens (human) ]

Gene ID: 112268039, updated on 10-Oct-2023

Summary

Go to the top of the page Help
Gene symbol
LOC112268039
Gene description
uncharacterized LOC112268039
See related
Ensembl:ENSG00000287187
Gene type
ncRNA
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See LOC112268039 in Genome Data Viewer
Location:
9q22.32
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 9 NC_000009.12 (96129863..96132229)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 9 NC_060933.1 (108301214..108303576)

Chromosome 9 - NC_000009.12Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC158435 Neighboring gene BRD4-independent group 4 enhancer GRCh37_chr9:98850190-98851389 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr9:98869639-98870212 Neighboring gene uncharacterized LOC158434 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr9:98889065-98889595 Neighboring gene NANOG-H3K27ac hESC enhancer GRCh37_chr9:98890980-98891503 Neighboring gene Sharpr-MPRA regulatory region 13927 Neighboring gene eukaryotic translation initiation factor 4B pseudogene 3 Neighboring gene ReSE screen-validated silencer GRCh37_chr9:98922000-98922212 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_110786 Neighboring gene uncharacterized LOC107987033 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr9:98949371-98950169

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Expression

Go to the top of the page Help
  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

Phenotypes

Go to the top of the page Help

Review eQTL and phenotype association data in this region using PheGenI

Variation

Go to the top of the page Help

See studies and variants in dbVar

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000009.12 Reference GRCh38.p14 Primary Assembly

    Range
    96129863..96132229
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_002956870.1 RNA Sequence

    Related
    ENST00000666931.1

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060933.1 Alternate T2T-CHM13v2.0

    Range
    108301214..108303576
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007079777.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases