U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

SMIM33 small integral membrane protein 33 [ Homo sapiens (human) ]

Gene ID: 111064649, updated on 15-Mar-2024

Summary

Official Symbol
SMIM33provided by HGNC
Official Full Name
small integral membrane protein 33provided by HGNC
Primary source
HGNC:HGNC:53645
See related
Ensembl:ENSG00000283288 AllianceGenome:HGNC:53645
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Summary
Predicted to be integral component of membrane. [provided by Alliance of Genome Resources, Apr 2022]
Orthologs
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Location:
5q31.2
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 5 NC_000005.10 (139471004..139473700)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 5 NC_060929.1 (139996065..139998761)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 5 NC_000005.9 (138850589..138853285)

Chromosome 5 - NC_000005.10Genomic Context describing neighboring genes Neighboring gene RNA, U5B small nuclear 4, pseudogene Neighboring gene endothelial cell surface expressed chemotaxis and apoptosis regulator Neighboring gene ATAC-STARR-seq lymphoblastoid active region 23233 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr5:138840510-138841099 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr5:138841100-138841688 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr5:138842278-138842865 Neighboring gene Sharpr-MPRA regulatory region 4960 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr5:138852141-138852662 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr5:138854227-138854748 Neighboring gene stimulator of interferon response cGAMP interactor 1 Neighboring gene Sharpr-MPRA regulatory region 11914 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 23234 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 23235 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 23236 Neighboring gene cancer-related nucleoside-triphosphatase-like Neighboring gene H3K4me1 hESC enhancer GRCh37_chr5:138864368-138864868 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr5:138865995-138866495 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 23237

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

General protein information

Preferred Names
small integral membrane protein 33

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001365197.1NP_001352126.1  small integral membrane protein 33

    Status: VALIDATED

    Source sequence(s)
    AC138517
    Consensus CDS
    CCDS93790.1
    UniProtKB/Swiss-Prot
    A0A1B0GW64
    Related
    ENSP00000490796.1, ENST00000637503.2

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000005.10 Reference GRCh38.p14 Primary Assembly

    Range
    139471004..139473700
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Reference GRCh38.p14 PATCHES

Genomic

  1. NW_021159996.1 Reference GRCh38.p14 PATCHES

    Range
    60799..63495
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060929.1 Alternate T2T-CHM13v2.0

    Range
    139996065..139998761
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)