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SNORD28B small nucleolar RNA, C/D box 28B [ Homo sapiens (human) ]

Gene ID: 109617011, updated on 10-Oct-2023

Summary

Official Symbol
SNORD28Bprovided by HGNC
Official Full Name
small nucleolar RNA, C/D box 28Bprovided by HGNC
Primary source
HGNC:HGNC:52225
See related
Ensembl:ENSG00000212295 AllianceGenome:HGNC:52225
Gene type
snoRNA
RefSeq status
PROVISIONAL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

Location:
6q25.3
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 6 NC_000006.12 (156378750..156378824)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 6 NC_060930.1 (157580927..157581001)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 6 NC_000006.11 (156699884..156699958)

Chromosome 6 - NC_000006.12Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC101928923 Neighboring gene uncharacterized LOC124901441 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr6:156496651-156497522 Neighboring gene uncharacterized LOC105378071 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 17704 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 17705 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr6:156717639-156718169 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr6:156718170-156718699 Neighboring gene uncharacterized LOC105378073 Neighboring gene NANOG hESC enhancer GRCh37_chr6:156824178-156824692 Neighboring gene nuclear-encoded mitochondrial tRNA-Val (TAC) 1-1

Genomic regions, transcripts, and products

General gene information

Gene Ontology Provided by GOA

Process Evidence Code Pubs
involved_in RNA processing IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
located_in nucleolus IEA
Inferred from Electronic Annotation
more info
 

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_145751.1 RNA Sequence

    Status: PROVISIONAL

    Source sequence(s)
    AL512658
    Related
    ENST00000390993.1

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000006.12 Reference GRCh38.p14 Primary Assembly

    Range
    156378750..156378824
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060930.1 Alternate T2T-CHM13v2.0

    Range
    157580927..157581001
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)