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Gm43403 predicted gene 43403 [ Mus musculus (house mouse) ]

Gene ID: 108168904, updated on 8-Feb-2024

Summary

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Official Symbol
Gm43403provided by MGI
Official Full Name
predicted gene 43403provided by MGI
Primary source
MGI:MGI:5663540
See related
Ensembl:ENSMUSG00000105676 AllianceGenome:MGI:5663540
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Expression
Biased expression in testis adult (RPKM 9.8) and genital fat pad adult (RPKM 0.6) See more
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Genomic context

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Location:
3 G3; 3
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 3 NC_000069.7 (137569448..137570087, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 3 NC_000069.6 (137863687..137864326, complement)

Chromosome 3 - NC_000069.7Genomic Context describing neighboring genes Neighboring gene VISTA enhancer mm4 Neighboring gene microRNA 6380 Neighboring gene predicted gene, 31678 Neighboring gene STARR-seq mESC enhancer starr_09091 Neighboring gene STARR-seq mESC enhancer starr_09093 Neighboring gene CapStarr-seq enhancer MGSCv37_chr3:137527362-137527471 Neighboring gene STARR-positive B cell enhancer ABC_E4600 Neighboring gene DnaJ heat shock protein family (Hsp40) member B14 Neighboring gene H2A.Z variant histone 1 Neighboring gene predicted gene, 40155

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

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GeneRIFs: Gene References Into Functions

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_169184.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC125154
    Related
    ENSMUST00000198830.3

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000069.7 Reference GRCm39 C57BL/6J

    Range
    137569448..137570087 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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