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LOC107986185 uncharacterized LOC107986185 [ Homo sapiens (human) ]

Gene ID: 107986185, updated on 10-Oct-2023

Summary

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Gene symbol
LOC107986185
Gene description
uncharacterized LOC107986185
Gene type
ncRNA
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Low expression observed in reference dataset See more
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Genomic context

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Location:
4p15.32
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 4 NC_000004.12 (15446327..15448494)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 4 NC_060928.1 (15428243..15430410)

Chromosome 4 - NC_000004.12Genomic Context describing neighboring genes Neighboring gene C1QTNF7 antisense RNA 1 Neighboring gene uncharacterized LOC124900673 Neighboring gene BRD4-independent group 4 enhancer GRCh37_chr4:15151436-15152635 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr4:15159790-15160509 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr4:15160510-15161228 Neighboring gene P300/CBP strongly-dependent group 1 enhancer GRCh37_chr4:15183990-15185189 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 21337 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr4:15257102-15257650 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr4:15280553-15281190 Neighboring gene C1q and TNF related 7 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 21338 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 21339 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr4:15480526-15481176 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr4:15503443-15503998 Neighboring gene uncharacterized LOC124900672 Neighboring gene coiled-coil and C2 domain containing 2A Neighboring gene OCT4-NANOG-H3K4me1 hESC enhancer GRCh37_chr4:15545311-15545892 Neighboring gene uncharacterized LOC124900671

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

Genotypes

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000004.12 Reference GRCh38.p14 Primary Assembly

    Range
    15446327..15448494
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_001741392.1 RNA Sequence

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060928.1 Alternate T2T-CHM13v2.0

    Range
    15428243..15430410
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007074497.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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