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SMIM15P1 SMIM15 pseudogene 1 [ Homo sapiens (human) ]

Gene ID: 107985631, updated on 10-Oct-2023

Summary

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Official Symbol
SMIM15P1provided by HGNC
Official Full Name
SMIM15 pseudogene 1provided by HGNC
Primary source
HGNC:HGNC:54940
See related
AllianceGenome:HGNC:54940
Gene type
pseudo
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

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Location:
Xp11.3
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) X NC_000023.11 (43000092..43000387)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) X NC_060947.1 (42406232..42406527)

Chromosome X - NC_000023.11Genomic Context describing neighboring genes Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chrX:42663629-42664199 Neighboring gene PPP1R2C family member C Neighboring gene OCT4-NANOG-H3K4me1 hESC enhancer GRCh37_chrX:42747793-42748339 Neighboring gene uncharacterized LOC105373188 Neighboring gene H3K27ac hESC enhancer GRCh37_chrX:42780737-42781675 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 20781 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chrX:42807743-42808658 Neighboring gene MED14-independent group 3 enhancer GRCh37_chrX:42835354-42836553 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chrX:42866214-42867063 Neighboring gene MED14-independent group 3 enhancer GRCh37_chrX:43035494-43036693 Neighboring gene p53-induced noncoding RNA Neighboring gene NANOG hESC enhancer GRCh37_chrX:43098410-43098977 Neighboring gene inosine monophosphate dehydrogenase 1 pseudogene 4

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000023.11 Reference GRCh38.p14 Primary Assembly

    Range
    43000092..43000387
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060947.1 Alternate T2T-CHM13v2.0

    Range
    42406232..42406527
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

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