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LINC02096 long intergenic non-protein coding RNA 2096 [ Homo sapiens (human) ]

Gene ID: 107984977, updated on 10-Oct-2023

Summary

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Official Symbol
LINC02096provided by HGNC
Official Full Name
long intergenic non-protein coding RNA 2096provided by HGNC
Primary source
HGNC:HGNC:52947
See related
Ensembl:ENSG00000238212 AllianceGenome:HGNC:52947
Gene type
ncRNA
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Low expression observed in reference dataset See more
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Genomic context

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Location:
17p12
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 17 NC_000017.11 (14834605..14900554)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 17 NC_060941.1 (14740536..14806615)

Chromosome 17 - NC_000017.11Genomic Context describing neighboring genes Neighboring gene ribosomal protein S18 pseudogene 12 Neighboring gene uncharacterized LOC105371545 Neighboring gene ribosomal protein L23a pseudogene 76 Neighboring gene CMT1A duplicated region transcript 7

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

Genotypes

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000017.11 Reference GRCh38.p14 Primary Assembly

    Range
    14834605..14900554
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_001753053.2 RNA Sequence

    Related
    ENST00000660746.1

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060941.1 Alternate T2T-CHM13v2.0

    Range
    14740536..14806615
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007087684.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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