U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC107984893 uncharacterized LOC107984893 [ Homo sapiens (human) ]

Gene ID: 107984893, updated on 10-Oct-2023

Summary

Go to the top of the page Help
Gene symbol
LOC107984893
Gene description
uncharacterized LOC107984893
Gene type
ncRNA
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Low expression observed in reference dataset See more
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
16p12.3
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 16 NC_000016.10 (17861090..17972501, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 16 NC_060940.1 (17868055..17979741, complement)

Chromosome 16 - NC_000016.10Genomic Context describing neighboring genes Neighboring gene xylosyltransferase 1 Neighboring gene uncharacterized LOC107987234 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 10509 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 10510 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 10511 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 10512 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr16:17564811-17565312 Neighboring gene uncharacterized LOC105371106 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr16:17591055-17591654 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 10513 Neighboring gene P300/CBP strongly-dependent group 1 enhancer GRCh37_chr16:17665142-17666341 Neighboring gene NANOG hESC enhancer GRCh37_chr16:17672718-17673219 Neighboring gene BRD4-independent group 4 enhancer GRCh37_chr16:17700860-17702059 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr16:17838498-17839174 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr16:17839175-17839850 Neighboring gene H3K27ac hESC enhancer GRCh37_chr16:17840527-17841202 Neighboring gene OCT4-NANOG-H3K4me1 hESC enhancer GRCh37_chr16:17851169-17851784 Neighboring gene OCT4-NANOG-H3K4me1 hESC enhancer GRCh37_chr16:17851785-17852400 Neighboring gene H3K27ac hESC enhancer GRCh37_chr16:17870498-17870998 Neighboring gene P300/CBP strongly-dependent group 1 enhancer GRCh37_chr16:17930405-17931604 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 10514 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 10515 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 10516 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 10517 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr16:18065894-18066422 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr16:18066423-18066951 Neighboring gene ribosomal protein L7 pseudogene 47 Neighboring gene uncharacterized LOC105371108 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr16:18220583-18221084 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr16:18221085-18221584 Neighboring gene geminin, DNA replication inhibitor pseudogene 2

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

Phenotypes

Go to the top of the page Help

Review eQTL and phenotype association data in this region using PheGenI

Variation

Go to the top of the page Help

See studies and variants in dbVar

Genotypes

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000016.10 Reference GRCh38.p14 Primary Assembly

    Range
    17861090..17972501 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_001752093.2 RNA Sequence

  2. XR_001752092.3 RNA Sequence

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060940.1 Alternate T2T-CHM13v2.0

    Range
    17868055..17979741 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007086933.1 RNA Sequence

  2. XR_007086932.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases