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LINC02132 long intergenic non-protein coding RNA 2132 [ Homo sapiens (human) ]

Gene ID: 107984811, updated on 10-Oct-2023

Summary

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Official Symbol
LINC02132provided by HGNC
Official Full Name
long intergenic non-protein coding RNA 2132provided by HGNC
Primary source
HGNC:HGNC:52992
See related
Ensembl:ENSG00000268804 AllianceGenome:HGNC:52992
Gene type
ncRNA
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Low expression observed in reference dataset See more
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Genomic context

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Location:
16q24.1
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 16 NC_000016.10 (85935277..85936174, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 16 NC_060940.1 (92001782..92003355, complement)

Chromosome 16 - NC_000016.10Genomic Context describing neighboring genes Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr16:85855434-85855943 Neighboring gene ribosomal protein L10a pseudogene 12 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 11289 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 11290 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 11291 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr16:85894503-85895002 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr16:85917116-85917616 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 7826 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 7827 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 11292 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 11293 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 11294 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 11295 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 11296 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 11297 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 7828 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 11298 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr16:85948479-85949144 Neighboring gene interferon regulatory factor 8 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 7829 Neighboring gene microRNA 6774 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 11299 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 11300 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr16:85969463-85969962 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 7830 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 11301 Neighboring gene uncharacterized LOC105371388 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 11302 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 11303 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 11304 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 11305 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 11306 Neighboring gene H3K27ac hESC enhancer GRCh37_chr16:86005846-86006346 Neighboring gene uncharacterized LOC124903741 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 11307

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

Genotypes

NCBI Reference Sequences (RefSeq)

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NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000016.10 Reference GRCh38.p14 Primary Assembly

    Range
    85935277..85936174 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_001752391.2 RNA Sequence

    Related
    ENST00000598933.2

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060940.1 Alternate T2T-CHM13v2.0

    Range
    92001782..92003355 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007086742.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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Molecular Biology Databases