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MTCO2P6 MT-CO2 pseudogene 6 [ Homo sapiens (human) ]

Gene ID: 107075266, updated on 10-Oct-2023

Summary

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Official Symbol
MTCO2P6provided by HGNC
Official Full Name
MT-CO2 pseudogene 6provided by HGNC
Primary source
HGNC:HGNC:52022
See related
Ensembl:ENSG00000240951 AllianceGenome:HGNC:52022
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

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Location:
3p11.1
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 3 NC_000003.12 (89587886..89588570, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 3 NC_060927.1 (89664248..89664932, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 3 NC_000003.11 (89637036..89637720, complement)

Chromosome 3 - NC_000003.12Genomic Context describing neighboring genes Neighboring gene ATP synthase subunit a-like Neighboring gene MT-ATP6 pseudogene 6 Neighboring gene MT-CO3 pseudogene 6 Neighboring gene MT-CO1 pseudogene 6 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr3:89867784-89868284 Neighboring gene BRD4-independent group 4 enhancer GRCh37_chr3:89880545-89881744 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr3:90007237-90007836 Neighboring gene MED14-independent group 3 enhancer GRCh37_chr3:90013784-90014983 Neighboring gene small nucleolar RNA U3

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

General gene information

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Other Names

  • mitochondrially encoded cytochrome c oxidase II pseudogene 6

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_046464.1 

    Range
    101..785
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000003.12 Reference GRCh38.p14 Primary Assembly

    Range
    89587886..89588570 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060927.1 Alternate T2T-CHM13v2.0

    Range
    89664248..89664932 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases