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MTCO3P40 MT-CO3 pseudogene 40 [ Homo sapiens (human) ]

Gene ID: 107075188, updated on 10-Oct-2023

Summary

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Official Symbol
MTCO3P40provided by HGNC
Official Full Name
MT-CO3 pseudogene 40provided by HGNC
Primary source
HGNC:HGNC:52143
See related
Ensembl:ENSG00000228046 AllianceGenome:HGNC:52143
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

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Location:
9q21.32
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 9 NC_000009.12 (82427350..82428025, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 9 NC_060933.1 (94576958..94577633, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 9 NC_000009.11 (85042265..85042940, complement)

Chromosome 9 - NC_000009.12Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105376107 Neighboring gene ribosomal protein S2 pseudogene 34 Neighboring gene NANOG hESC enhancer GRCh37_chr9:84785175-84785704 Neighboring gene P300/CBP strongly-dependent group 1 enhancer GRCh37_chr9:84887382-84888581 Neighboring gene VISTA enhancer hs752 Neighboring gene VISTA enhancer hs800 Neighboring gene uncharacterized LOC112268046 Neighboring gene putative UPF0607 protein ENSP00000381418 Neighboring gene nuclear pore associated protein 1 pseudogene 8

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

General gene information

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Other Names

  • mitochondrially encoded cytochrome c oxidase III pseudogene 40

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_046483.1 

    Range
    101..776
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    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000009.12 Reference GRCh38.p14 Primary Assembly

    Range
    82427350..82428025 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060933.1 Alternate T2T-CHM13v2.0

    Range
    94576958..94577633 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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