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RPSAP65 ribosomal protein SA pseudogene 65 [ Homo sapiens (human) ]

Gene ID: 107075109, updated on 10-Dec-2024

Summary

Official Symbol
RPSAP65provided by HGNC
Official Full Name
ribosomal protein SA pseudogene 65provided by HGNC
Primary source
HGNC:HGNC:51914
See related
Ensembl:ENSG00000223683 AllianceGenome:HGNC:51914
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

See RPSAP65 in Genome Data Viewer
Location:
1p31.3
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 1 NC_000001.11 (63262049..63262749)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 1 NC_060925.1 (63137715..63138415)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 1 NC_000001.10 (63727720..63728420)

Chromosome 1 - NC_000001.11Genomic Context describing neighboring genes Neighboring gene long intergenic non-protein coding RNA 1739 Neighboring gene MPRA-validated peak269 silencer Neighboring gene long intergenic non-protein coding RNA 466 Neighboring gene uncharacterized LOC105378770 Neighboring gene NANOG-H3K4me1 hESC enhancer GRCh37_chr1:63663717-63664472 Neighboring gene NANOG-H3K4me1 hESC enhancer GRCh37_chr1:63664473-63665227 Neighboring gene VISTA enhancer hs764 Neighboring gene RNA, 5S ribosomal pseudogene 49 Neighboring gene melanoma risk locus-associated MPRA allelic enhancer 1:63727542 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr1:63751744-63752272 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr1:63752273-63752802 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr1:63764905-63765721 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 947 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 948 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 949 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr1:63788679-63789368 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr1:63792285-63793153 Neighboring gene FOXD3 antisense RNA 1 Neighboring gene microRNA 6068 Neighboring gene forkhead box D3

Genomic regions, transcripts, and products

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_046548.2 

    Range
    101..801
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000001.11 Reference GRCh38.p14 Primary Assembly

    Range
    63262049..63262749
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060925.1 Alternate T2T-CHM13v2.0

    Range
    63137715..63138415
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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