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RNU2-22P RNA, U2 small nuclear 22, pseudogene [ Homo sapiens (human) ]

Gene ID: 106660611, updated on 10-Oct-2023

Summary

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Official Symbol
RNU2-22Pprovided by HGNC
Official Full Name
RNA, U2 small nuclear 22, pseudogeneprovided by HGNC
Primary source
HGNC:HGNC:48515
See related
Ensembl:ENSG00000223198 AllianceGenome:HGNC:48515
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

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Location:
2q37.1
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 2 NC_000002.12 (231501990..231502201, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 2 NC_060926.1 (231986429..231986640, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 2 NC_000002.11 (232366701..232366912, complement)

Chromosome 2 - NC_000002.12Genomic Context describing neighboring genes Neighboring gene nucleolin Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr2:232328263-232328934 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr2:232328935-232329604 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 17287 Neighboring gene small nucleolar RNA, C/D box 82 Neighboring gene NANOG hESC enhancer GRCh37_chr2:232340658-232341163 Neighboring gene uncharacterized LOC107985998 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr2:232345298-232345810 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr2:232345811-232346321 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 17288 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 12428 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 17289 Neighboring gene long intergenic non-protein coding RNA 471 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr2:232378431-232379240 Neighboring gene neuromedin U receptor 1 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr2:232390957-232391458 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr2:232392564-232393091 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr2:232393092-232393618 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 12430

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

General gene information

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NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_042900.1 

    Range
    101..312
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000002.12 Reference GRCh38.p14 Primary Assembly

    Range
    231501990..231502201 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060926.1 Alternate T2T-CHM13v2.0

    Range
    231986429..231986640 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

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