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RNU6-534P RNA, U6 small nuclear 534, pseudogene [ Homo sapiens (human) ]

Gene ID: 106481978, updated on 10-Oct-2023

Summary

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Official Symbol
RNU6-534Pprovided by HGNC
Official Full Name
RNA, U6 small nuclear 534, pseudogeneprovided by HGNC
Primary source
HGNC:HGNC:47497
See related
Ensembl:ENSG00000201747 AllianceGenome:HGNC:47497
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

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See RNU6-534P in Genome Data Viewer
Location:
7p21.3
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 7 NC_000007.14 (7906519..7906624)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 7 NC_060931.1 (8025014..8025119)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 7 NC_000007.13 (7946150..7946255)

Chromosome 7 - NC_000007.14Genomic Context describing neighboring genes Neighboring gene UBAP1-MVB12-associated (UMA) domain containing 1 Neighboring gene ribosomal protein L23a pseudogene 51 Neighboring gene NANOG-H3K27ac hESC enhancer GRCh37_chr7:7832105-7832786 Neighboring gene uncharacterized LOC105379719 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 25648 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 25649 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr7:7860565-7861512 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_100048 Neighboring gene uncharacterized LOC124901586 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 25650 Neighboring gene cyclin B2 pseudogene 1 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 25651 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 17965 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 25652 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 17966 Neighboring gene GLCCI1 divergent transcript

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

General gene information

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NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_043396.1 

    Range
    101..206
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000007.14 Reference GRCh38.p14 Primary Assembly

    Range
    7906519..7906624
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060931.1 Alternate T2T-CHM13v2.0

    Range
    8025014..8025119
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

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