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RN7SL45P RNA, 7SL, cytoplasmic 45, pseudogene [ Homo sapiens (human) ]

Gene ID: 106481975, updated on 10-Oct-2023

Summary

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Official Symbol
RN7SL45Pprovided by HGNC
Official Full Name
RNA, 7SL, cytoplasmic 45, pseudogeneprovided by HGNC
Primary source
HGNC:HGNC:46061
See related
Ensembl:ENSG00000264862 AllianceGenome:HGNC:46061
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

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Location:
17q11.2
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 17 NC_000017.11 (31518441..31518729)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 17 NC_060941.1 (32464218..32464506)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 17 NC_000017.10 (29845459..29845747)

Chromosome 17 - NC_000017.11Genomic Context describing neighboring genes Neighboring gene RAB11 family interacting protein 4 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr17:29751937-29752664 Neighboring gene uncharacterized LOC105371725 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr17:29760725-29761454 Neighboring gene H3K27ac hESC enhancer GRCh37_chr17:29762116-29762616 Neighboring gene H3K27ac hESC enhancer GRCh37_chr17:29762617-29763117 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 12011 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr17:29781223-29781724 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr17:29781725-29782224 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr17:29784216-29785064 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr17:29785065-29785912 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr17:29786467-29786968 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr17:29786969-29787468 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr17:29794364-29795058 Neighboring gene NANOG-H3K4me1 hESC enhancer GRCh37_chr17:29796711-29797212 Neighboring gene RNA, 7SL, cytoplasmic 79, pseudogene Neighboring gene H3K4me1 hESC enhancer GRCh37_chr17:29803345-29804161 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 8410 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 8411 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 12012 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr17:29825931-29826892 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr17:29826893-29827852 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 12013 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr17:29836658-29837448 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr17:29850121-29850755 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr17:29851414-29852028 Neighboring gene Sharpr-MPRA regulatory region 11348 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 12014 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 12015 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 12016 Neighboring gene microRNA 4724 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 8412 Neighboring gene tRNA-Thr (anticodon CGT) 4-1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

General gene information

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NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_045424.1 

    Range
    101..389
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000017.11 Reference GRCh38.p14 Primary Assembly

    Range
    31518441..31518729
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060941.1 Alternate T2T-CHM13v2.0

    Range
    32464218..32464506
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

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