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RNU6-1303P RNA, U6 small nuclear 1303, pseudogene [ Homo sapiens (human) ]

Gene ID: 106481949, updated on 10-Oct-2023

Summary

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Official Symbol
RNU6-1303Pprovided by HGNC
Official Full Name
RNA, U6 small nuclear 1303, pseudogeneprovided by HGNC
Primary source
HGNC:HGNC:48266
See related
Ensembl:ENSG00000201711 AllianceGenome:HGNC:48266
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

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Location:
9q21.2
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 9 NC_000009.12 (77635203..77635309, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 9 NC_060933.1 (89792198..89792304, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 9 NC_000009.11 (80250119..80250225, complement)

Chromosome 9 - NC_000009.12Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC124902185 Neighboring gene GNA14 antisense RNA 1 Neighboring gene G protein subunit alpha 14 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr9:80149170-80149682 Neighboring gene MPRA-validated peak7272 silencer Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr9:80200181-80201072 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr9:80202401-80203306 Neighboring gene nuclear transport factor 2 pseudogene 3 Neighboring gene Sharpr-MPRA regulatory region 6496 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 28484 Neighboring gene G protein subunit alpha q Neighboring gene MPRA-validated peak7274 silencer Neighboring gene uncharacterized LOC107987081 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr9:80571382-80571920 Neighboring gene Sharpr-MPRA regulatory region 6688 Neighboring gene ReSE screen-validated silencer GRCh37_chr9:80627247-80627399 Neighboring gene H3K27ac hESC enhancer GRCh37_chr9:80645916-80646810 Neighboring gene uncharacterized LOC107987031

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

General gene information

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NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_045336.1 

    Range
    101..207
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000009.12 Reference GRCh38.p14 Primary Assembly

    Range
    77635203..77635309 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060933.1 Alternate T2T-CHM13v2.0

    Range
    89792198..89792304 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

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