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RNU6-996P RNA, U6 small nuclear 996, pseudogene [ Homo sapiens (human) ]

Gene ID: 106481928, updated on 10-Oct-2023

Summary

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Official Symbol
RNU6-996Pprovided by HGNC
Official Full Name
RNA, U6 small nuclear 996, pseudogeneprovided by HGNC
Primary source
HGNC:HGNC:47959
See related
Ensembl:ENSG00000202308 AllianceGenome:HGNC:47959
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

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Location:
9q31.2
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 9 NC_000009.12 (107663140..107663246, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 9 NC_060933.1 (119834935..119835041, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 9 NC_000009.11 (110425421..110425527, complement)

Chromosome 9 - NC_000009.12Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105376206 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 28751 Neighboring gene peptidylprolyl isomerase A pseudogene 88 Neighboring gene uncharacterized LOC105376205 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr9:110349632-110350157 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr9:110350158-110350682 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr9:110394581-110395218 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr9:110399294-110399842 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr9:110399843-110400391 Neighboring gene ReSE screen-validated silencer GRCh37_chr9:110412164-110412336 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_104360 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_104366 Neighboring gene uncharacterized LOC105376207 Neighboring gene uncharacterized LOC124902242

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

General gene information

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NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_042969.1 

    Range
    101..207
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000009.12 Reference GRCh38.p14 Primary Assembly

    Range
    107663140..107663246 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060933.1 Alternate T2T-CHM13v2.0

    Range
    119834935..119835041 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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