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RNU6-672P RNA, U6 small nuclear 672, pseudogene [ Homo sapiens (human) ]

Gene ID: 106481910, updated on 10-Oct-2023

Summary

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Official Symbol
RNU6-672Pprovided by HGNC
Official Full Name
RNA, U6 small nuclear 672, pseudogeneprovided by HGNC
Primary source
HGNC:HGNC:47635
See related
Ensembl:ENSG00000206638 AllianceGenome:HGNC:47635
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

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Location:
11q13.4
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 11 NC_000011.10 (72869544..72869650, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 11 NC_060935.1 (72797745..72797851, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 11 NC_000011.9 (72580589..72580695, complement)

Chromosome 11 - NC_000011.10Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC107984421 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 3729 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 5207 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 5208 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 3730 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 3731 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 5209 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 3732 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 5210 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 5211 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 5212 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr11:72537383-72537883 Neighboring gene autophagy related 16 like 2 Neighboring gene NANOG hESC enhancer GRCh37_chr11:72559943-72560444 Neighboring gene FCH and double SH3 domains 2 Neighboring gene Sharpr-MPRA regulatory region 15519 Neighboring gene ribosomal protein L15 pseudogene 16 Neighboring gene MPRA-validated peak1347 silencer Neighboring gene H3K4me1 hESC enhancer GRCh37_chr11:72851339-72851960 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr11:72851961-72852582 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 3734 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 3735 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 5215 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 5216 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 5218 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 5217 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 5219 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 5220 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 5221 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 5222 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 5223 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 5224 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 5225 Neighboring gene imatinib upregulated ABL suppressing lncRNA 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

General gene information

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NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_046014.1 

    Range
    101..207
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000011.10 Reference GRCh38.p14 Primary Assembly

    Range
    72869544..72869650 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060935.1 Alternate T2T-CHM13v2.0

    Range
    72797745..72797851 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

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