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RNU6-280P RNA, U6 small nuclear 280, pseudogene [ Homo sapiens (human) ]

Gene ID: 106481886, updated on 10-Oct-2023

Summary

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Official Symbol
RNU6-280Pprovided by HGNC
Official Full Name
RNA, U6 small nuclear 280, pseudogeneprovided by HGNC
Primary source
HGNC:HGNC:47243
See related
Ensembl:ENSG00000201015 AllianceGenome:HGNC:47243
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
RNU6-1221P
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Genomic context

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Location:
6q12
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 6 NC_000006.12 (67546651..67546754)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 6 NC_060930.1 (68703375..68703478)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 6 NC_000006.11 (68256544..68256647)

Chromosome 6 - NC_000006.12Genomic Context describing neighboring genes Neighboring gene SH3 domain binding protein 4 pseudogene Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_94210 Neighboring gene RNA, 5S ribosomal pseudogene 208 Neighboring gene MPRA-validated peak5873 silencer Neighboring gene BRD4-independent group 4 enhancer GRCh37_chr6:68531597-68532796 Neighboring gene Sharpr-MPRA regulatory region 5869 Neighboring gene uncharacterized LOC105377845 Neighboring gene uncharacterized LOC107986610 Neighboring gene histone-lysine N-methyltransferase SUV39H2-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

General gene information

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Other Names

  • RNA, U6 small nuclear 1221, pseudogene

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_044665.1 

    Range
    101..204
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000006.12 Reference GRCh38.p14 Primary Assembly

    Range
    67546651..67546754
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Reference GRCh38.p14 PATCHES

Genomic

  1. NW_009646200.1 Reference GRCh38.p14 PATCHES

    Range
    13186..13289
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060930.1 Alternate T2T-CHM13v2.0

    Range
    68703375..68703478
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

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