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RN7SL78P RNA, 7SL, cytoplasmic 78, pseudogene [ Homo sapiens (human) ]

Gene ID: 106481752, updated on 8-Nov-2023

Summary

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Official Symbol
RN7SL78Pprovided by HGNC
Official Full Name
RNA, 7SL, cytoplasmic 78, pseudogeneprovided by HGNC
Primary source
HGNC:HGNC:46094
See related
Ensembl:ENSG00000243782 AllianceGenome:HGNC:46094
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

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Location:
10q23.31
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 10 NC_000010.11 (87832818..87833098, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 10 NC_060934.1 (88716729..88717009, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 10 NC_000010.10 (89592575..89592855, complement)

Chromosome 10 - NC_000010.11Genomic Context describing neighboring genes Neighboring gene 3'-phosphoadenosine 5'-phosphosulfate synthase 2 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr10:89503239-89503738 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 3712 Neighboring gene ReSE screen-validated silencer GRCh37_chr10:89526475-89526686 Neighboring gene uncharacterized LOC124902476 Neighboring gene ATPase family AAA domain containing 1 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 2584 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 3713 Neighboring gene Sharpr-MPRA regulatory region 3344 Neighboring gene MED14-independent group 3 enhancer GRCh37_chr10:89602409-89603608 Neighboring gene cofilin 1 pseudogene 1 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 3714 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 3715 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 3716 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 2585 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 2586 Neighboring gene killin, p53 regulated DNA replication inhibitor Neighboring gene phosphatase and tensin homolog Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 2587 Neighboring gene ribosomal protein L11 pseudogene 3

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

General gene information

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NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_043631.1 

    Range
    101..381
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000010.11 Reference GRCh38.p14 Primary Assembly

    Range
    87832818..87833098 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Reference GRCh38.p14 PATCHES

Genomic

  1. NW_013171807.1 Reference GRCh38.p14 PATCHES

    Range
    48640..48920 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060934.1 Alternate T2T-CHM13v2.0

    Range
    88716729..88717009 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Other Literature Sources
Molecular Biology Databases